RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 GPATCH3Q96I76 525 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 RNPC3Q96LT9 517 aaKnown RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 NECAB3Q96P71 396 aaPredicted RBP5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 CBX8Q9HC52 389 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 SEC31BQ9NQW1 1179 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 DZANK1Q9NVP4 752 aa5.25□□□□□ -1.57
HMGB1P25-201ENST00000468402 FAM221BA6H8Z2 402 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 PDE2AO00408 941 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 MARCH6O60337 910 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 RAB11FIP3O75154 756 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 CDC45O75419 566 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 F13A1P00488 732 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 FAM157BP0CG42 384 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 MAPTP10636 758 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 CRKP46108 304 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 ZNF165P49910 485 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 SRSF11Q05519 484 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 GRIN2CQ14957 1233 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 LARP1BQ659C4 914 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 BNC2Q6ZN30 1099 aaPredicted RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 AGMOQ6ZNB7 445 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 GK5Q6ZS86 529 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 FAM196AQ6ZSG2 479 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 HFE2Q6ZVN8 426 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 DHX32Q7L7V1 743 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 CEP120Q8N960 986 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 FBXO27Q8NI29 283 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 ANKRD24Q8TF21 1146 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 KCNB2Q92953 911 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 TRERF1Q96PN7 1200 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 HHIPQ96QV1 700 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 DNAJC7Q99615 494 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 NUCKS1Q9H1E3 243 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 RBSNQ9H1K0 784 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 TMEM39AQ9NV64 488 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 FANCLQ9NW38 375 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 IFT57Q9NWB7 429 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 MARK1Q9P0L2 795 aa5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 NSFL1CQ9UNZ2 370 aaKnown RBP5.24□□□□□ -1.57
HMGB1P25-201ENST00000468402 SLC35F4A4IF30 521 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 FAM177BA6PVY3 158 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 J3QW42 95 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 GPR25O00155 361 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 ENC1O14682 589 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 DNAJC6O75061 913 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 PAGE1O75459 146 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 ARHGEF15O94989 841 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 GHRHP01286 108 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 CELA2BP08218 269 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 SLURP2P0DP57 97 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 GARTP22102 1010 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 SOX18P35713 384 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 MICALL1Q8N3F8 863 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 MICAL1Q8TDZ2 1067 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 SH3TC2Q8TF17 1288 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 NXPE3Q969Y0 559 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 SHDQ96IW2 340 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 DCAF5Q96JK2 942 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 CHMP4AQ9BY43 222 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 SPC25Q9HBM1 224 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 STRN4Q9NRL3 753 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 ACTR10Q9NZ32 417 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 NOP58Q9Y2X3 529 aaKnown RBP5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 PCDHB5Q9Y5E4 795 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 COL4A3BPQ9Y5P4 624 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 ROBO2Q9HCK4 1378 aa5.23□□□□□ -1.57
HMGB1P25-201ENST00000468402 LOC102724428A0A0B4J2F2 783 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 H7C1W4 665 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 ENPP3O14638 875 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 EIF5BO60841 1220 aaKnown RBP5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 KIF4AO95239 1232 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 CD33P20138 364 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 AMPD1P23109 780 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 ITPKAP23677 461 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 SIK1P57059 783 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 RPS26P62854 115 aaKnown RBP5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 TNP2Q05952 138 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 LAMC2Q13753 1193 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 SEPT6Q14141 434 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 LBRQ14739 615 aaKnown RBP5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 TAF7LQ5H9L4 462 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 CEP135Q66GS9 1140 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 LRP10Q7Z4F1 713 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 SLITRK4Q8IW52 837 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 TRIM42Q8IWZ5 723 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 TMEM102Q8N9M5 508 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 APPBP2Q92624 585 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 PBX4Q9BYU1 374 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 RASSF4Q9H2L5 321 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 KCNQ5Q9NR82 932 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 PRR12Q9ULL5 1215 aa5.22□□□□□ -1.57
HMGB1P25-201ENST00000468402 SCO2A0A1W2PP80 73 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 EFSO43281 561 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 SMNDC1O75940 238 aaKnown RBP eCLIP5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 DDAH1O94760 285 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 MAP3K6O95382 1288 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 FURINP09958 794 aa5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 EIF2AK2P19525 551 aaKnown RBP5.21□□□□□ -1.58
HMGB1P25-201ENST00000468402 NRLP54845 237 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms