RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GDF15Q99988 308 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 PRDM6Q9NQX0 595 aa13.25□□□□□ -0.29
HDAC3-203ENST00000467533 RPTORQ8N122 1335 aa13.24□□□□□ -0.29
HDAC3-203ENST00000467533 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
HDAC3-203ENST00000467533 PRKCZQ05513 592 aa13.24□□□□□ -0.29
HDAC3-203ENST00000467533 SNAPC2Q13487 334 aa13.24□□□□□ -0.29
HDAC3-203ENST00000467533 LRIT3Q3SXY7 679 aa13.24□□□□□ -0.29
HDAC3-203ENST00000467533 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
HDAC3-203ENST00000467533 TTLL11Q8NHH1 800 aa13.24□□□□□ -0.29
HDAC3-203ENST00000467533 ZMYND8Q9ULU4 1186 aaPredicted RBP13.24□□□□□ -0.29
HDAC3-203ENST00000467533 CHL1O00533 1208 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 ERO1BQ86YB8 467 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 TDHQ8IZJ6 230 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 TEPSINQ96N21 525 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
HDAC3-203ENST00000467533 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
HDAC3-203ENST00000467533 JAG2Q9Y219 1238 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
HDAC3-203ENST00000467533 TCP10L2B9ZVM9 353 aa13.22□□□□□ -0.29
HDAC3-203ENST00000467533 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
HDAC3-203ENST00000467533 TNNI2P48788 182 aa13.22□□□□□ -0.29
HDAC3-203ENST00000467533 DEFB118Q96PH6 123 aa13.22□□□□□ -0.29
HDAC3-203ENST00000467533 MPHOSPH8Q99549 860 aa13.22□□□□□ -0.29
HDAC3-203ENST00000467533 TMEM39BQ9GZU3 492 aa13.22□□□□□ -0.29
HDAC3-203ENST00000467533 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
HDAC3-203ENST00000467533 IRF6O14896 467 aa13.21□□□□□ -0.29
HDAC3-203ENST00000467533 FCGRTP55899 365 aa13.21□□□□□ -0.29
HDAC3-203ENST00000467533 FKBP1AP62942 108 aaKnown RBP13.21□□□□□ -0.29
HDAC3-203ENST00000467533 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-203ENST00000467533 PPIL2Q13356 520 aa13.21□□□□□ -0.29
HDAC3-203ENST00000467533 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
HDAC3-203ENST00000467533 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.29
HDAC3-203ENST00000467533 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
HDAC3-203ENST00000467533 WRNIP1Q96S55 665 aa13.21□□□□□ -0.29
HDAC3-203ENST00000467533 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-203ENST00000467533 ADGRA2Q96PE1 1338 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 IRS2Q9Y4H2 1338 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 DDX60LQ5H9U9 1706 aaKnown RBP13.2□□□□□ -0.3
HDAC3-203ENST00000467533 PDHXO00330 501 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 ADCY3O60266 1144 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 INHAP05111 366 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 SYN1P17600 705 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 CAPN2P17655 700 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 MAGEA10P43363 369 aaPredicted RBP13.2□□□□□ -0.3
HDAC3-203ENST00000467533 CHRNDQ07001 517 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 NECAB2Q7Z6G3 386 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 GABRQQ9UN88 632 aa13.2□□□□□ -0.3
HDAC3-203ENST00000467533 SNAP23O00161 211 aa13.19□□□□□ -0.3
HDAC3-203ENST00000467533 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
HDAC3-203ENST00000467533 IL1R1P14778 569 aa13.19□□□□□ -0.3
HDAC3-203ENST00000467533 ELNP15502 786 aa13.19□□□□□ -0.3
HDAC3-203ENST00000467533 ITGA6P23229 1130 aa13.19□□□□□ -0.3
HDAC3-203ENST00000467533 ANKRD23Q86SG2 305 aa13.19□□□□□ -0.3
HDAC3-203ENST00000467533 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
HDAC3-203ENST00000467533 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
HDAC3-203ENST00000467533 ZKSCAN4Q969J2 545 aaPredicted RBP13.19□□□□□ -0.3
HDAC3-203ENST00000467533 UBE2OQ9C0C9 1292 aaKnown RBP13.19□□□□□ -0.3
HDAC3-203ENST00000467533 PARK7Q99497 189 aaKnown RBP13.18□□□□□ -0.3
HDAC3-203ENST00000467533 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
HDAC3-203ENST00000467533 TTF2Q9UNY4 1162 aaKnown RBP13.18□□□□□ -0.3
HDAC3-203ENST00000467533 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 TAF5LO75529 589 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 COL9A1P20849 921 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
HDAC3-203ENST00000467533 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 GUCD1Q96NT3 240 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 PAK6Q9NQU5 681 aaPredicted RBP13.17□□□□□ -0.3
HDAC3-203ENST00000467533 TAOK2Q9UL54 1235 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 MAP3K2Q9Y2U5 619 aa13.17□□□□□ -0.3
HDAC3-203ENST00000467533 PPATQ06203 517 aa13.16□□□□□ -0.3
HDAC3-203ENST00000467533 NEXNQ0ZGT2 675 aa13.16□□□□□ -0.3
HDAC3-203ENST00000467533 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
HDAC3-203ENST00000467533 C15orf52Q6ZUT6 534 aaKnown RBP13.16□□□□□ -0.3
HDAC3-203ENST00000467533 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
HDAC3-203ENST00000467533 CRISPLD2Q9H0B8 497 aa13.16□□□□□ -0.3
HDAC3-203ENST00000467533 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
HDAC3-203ENST00000467533 CRKP46108 304 aa13.15□□□□□ -0.3
HDAC3-203ENST00000467533 FLT3LGP49771 235 aa13.15□□□□□ -0.3
HDAC3-203ENST00000467533 CACNB3P54284 484 aa13.15□□□□□ -0.3
HDAC3-203ENST00000467533 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
HDAC3-203ENST00000467533 HOOK2Q96ED9 719 aa13.15□□□□□ -0.3
HDAC3-203ENST00000467533 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.3
HDAC3-203ENST00000467533 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
HDAC3-203ENST00000467533 BCRP11274 1271 aa13.14□□□□□ -0.31
HDAC3-203ENST00000467533 CWF19L2Q2TBE0 894 aaKnown RBP13.14□□□□□ -0.31
HDAC3-203ENST00000467533 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
HDAC3-203ENST00000467533 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
HDAC3-203ENST00000467533 ANKLE1Q8NAG6 615 aa13.14□□□□□ -0.31
HDAC3-203ENST00000467533 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
HDAC3-203ENST00000467533 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
HDAC3-203ENST00000467533 TNPO2O14787 897 aaKnown RBP13.13□□□□□ -0.31
HDAC3-203ENST00000467533 CYP2C8P10632 490 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 INPP5BP32019 993 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 IRF5Q13568 498 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 ZNF341Q9BYN7 854 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
HDAC3-203ENST00000467533 C11orf49Q9H6J7 331 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms