RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	GIMAP6	Q6P9H5	292 aa		13.14	□□□□□ -0.31
MUC1-216	ENST00000467134	RASEF	Q8IZ41	740 aa		13.14	□□□□□ -0.31
MUC1-216	ENST00000467134	TTLL6	Q8N841	843 aa		13.14	□□□□□ -0.31
MUC1-216	ENST00000467134	STRBP	Q96SI9	672 aa	Known RBP	13.14	□□□□□ -0.31
MUC1-216	ENST00000467134	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.14	□□□□□ -0.31
MUC1-216	ENST00000467134	CD2AP	Q9Y5K6	639 aa		13.14	□□□□□ -0.31
MUC1-216	ENST00000467134	FOXP2	O15409	715 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	CHGB	P05060	677 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	LDHC	P07864	332 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	VPS53	Q5VIR6	699 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	NAA16	Q6N069	864 aa	Predicted RBP	13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	CCDC129	Q6ZRS4	1044 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	PODN	Q7Z5L7	613 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	RTKN2	Q8IZC4	609 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	AIDA	Q96BJ3	306 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	NSUN4	Q96CB9	384 aa	Known RBP	13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	TTC14	Q96N46	770 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	PSMD1	Q99460	953 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	CYP46A1	Q9Y6A2	500 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	DDX60L	Q5H9U9	1706 aa	Known RBP	13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	WDR19	Q8NEZ3	1342 aa		13.13	□□□□□ -0.31
MUC1-216	ENST00000467134	CYP21A2	P08686	494 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	KCNA3	P22001	575 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	CYP7A1	P22680	504 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	CHRNA5	P30532	468 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	NT5C2	P49902	561 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	NEK4	P51957	841 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	CCDC93	Q567U6	631 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	RUFY3	Q7L099	469 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	SLF2	Q8IX21	1173 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	FAM163A	Q96GL9	167 aa	Predicted RBP	13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	RIOK1	Q9BRS2	568 aa	Known RBP	13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	RAI14	Q9P0K7	980 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	ABCF2	Q9UG63	623 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	NAV1	Q8NEY1	1877 aa		13.12	□□□□□ -0.31
MUC1-216	ENST00000467134	ECM29	Q5VYK3	1845 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	MAGEB6P1	A0A0J9YX57	407 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	PATL2	C9JE40	543 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	MBD4	O95243	580 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	LDHB	P07195	334 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	PPP4C	P60510	307 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	MECOM	Q03112	1051 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	R3HDM1	Q15032	1099 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	ANKRD1	Q15327	319 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	IMMT	Q16891	758 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	BLOC1S2	Q6QNY1	142 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	DZIP1	Q86YF9	867 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	FBXL16	Q8N461	479 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	JAKMIP1	Q96N16	626 aa	Known RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	NACAP1	Q9BZK3	213 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	SCN9A	Q15858	1988 aa		13.11	□□□□□ -0.31
MUC1-216	ENST00000467134	FGA	P02671	866 aa		13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	PC	P11498	1178 aa	Known RBP	13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	KIAA2012	Q0VF49	1180 aa		13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	CHAF1A	Q13111	956 aa	Predicted RBP	13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	SLFNL1	Q499Z3	407 aa		13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	ZNF384	Q8TF68	577 aa		13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	NEK1	Q96PY6	1258 aa		13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	GAK	O14976	1311 aa		13.1	□□□□□ -0.31
MUC1-216	ENST00000467134	ZBTB7A	O95365	584 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	CD2BP2	O95400	341 aa	Known RBP	13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	DPEP1	P16444	411 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	CAST	P20810	708 aa	Known RBP	13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	RPS6KB1	P23443	525 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	PRDX5	P30044	214 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	CUL4A	Q13619	759 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	SLC51A	Q86UW1	340 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	INTS4	Q96HW7	963 aa	Known RBP	13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	MRI	Q9BWK5	157 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	PIM2	Q9P1W9	311 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	MROH7-TTC4	A0A0A0MT08	1334 aa		13.09	□□□□□ -0.31
MUC1-216	ENST00000467134	GSG1L2	A8MUP6	293 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	ZNF213	O14771	459 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	PLCG2	P16885	1265 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	HDLBP	Q00341	1268 aa	Known RBP	13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	ADCK5	Q3MIX3	580 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	LCORL	Q8N3X6	602 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	MTA3	Q9BTC8	594 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	AGXT2	Q9BYV1	514 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	ARMT1	Q9H993	441 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	ATP8A2	Q9NTI2	1148 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	ANAPC4	Q9UJX5	808 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	LTBP3	Q9NS15	1303 aa		13.08	□□□□□ -0.32
MUC1-216	ENST00000467134	BAG3	O95817	575 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	DDIT3	P35638	169 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	PTGER2	P43116	358 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	MFSD14B	Q5SR56	506 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	STRIP1	Q5VSL9	837 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	DHX32	Q7L7V1	743 aa	Known RBP	13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	ADGRA1	Q86SQ6	560 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	IFNL3	Q8IZI9	196 aa		13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	GPR101	Q96P66	508 aa	Predicted RBP	13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	NOL10	Q9BSC4	688 aa	Known RBP	13.07	□□□□□ -0.32
MUC1-216	ENST00000467134	UPF3B	Q9BZI7	483 aa	Known RBP	13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms