RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ABCF2Q9UG63 623 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 TTF2Q9UNY4 1162 aaKnown RBP19.46■□□□□ 0.71
GPC1-207ENST00000466624 AK9Q5TCS8 1911 aa19.46■□□□□ 0.71
GPC1-207ENST00000466624 VEGFAP15692 232 aaPredicted RBP19.45■□□□□ 0.7
GPC1-207ENST00000466624 GRIK5Q16478 980 aa19.45■□□□□ 0.7
GPC1-207ENST00000466624 ADARB2Q9NS39 739 aaKnown RBP19.45■□□□□ 0.7
GPC1-207ENST00000466624 SERPINA10Q9UK55 444 aa19.45■□□□□ 0.7
GPC1-207ENST00000466624 GOLIM4O00461 696 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 EPS15P42566 896 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 TBC1D9Q6ZT07 1266 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 MTMR14Q8NCE2 650 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 ANTXR1Q9H6X2 564 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 PIH1D3Q9NQM4 214 aaKnown RBP19.44■□□□□ 0.7
GPC1-207ENST00000466624 LRP2BPQ9P2M1 347 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 NDUFB9Q9Y6M9 179 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 ADAMTSL1Q8N6G6 1762 aa19.44■□□□□ 0.7
GPC1-207ENST00000466624 EPHX2P34913 555 aa19.43■□□□□ 0.7
GPC1-207ENST00000466624 HHIPL2Q6UWX4 724 aa19.43■□□□□ 0.7
GPC1-207ENST00000466624 SLF2Q8IX21 1173 aa19.43■□□□□ 0.7
GPC1-207ENST00000466624 TAF1DQ9H5J8 278 aaPredicted RBP19.43■□□□□ 0.7
GPC1-207ENST00000466624 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
GPC1-207ENST00000466624 F8W031 263 aaPredicted RBP19.42■□□□□ 0.7
GPC1-207ENST00000466624 MAP3K12Q12852 859 aa19.42■□□□□ 0.7
GPC1-207ENST00000466624 USP50Q70EL3 339 aaPredicted RBP19.42■□□□□ 0.7
GPC1-207ENST00000466624 PNMA8AQ86V59 439 aaPredicted RBP19.42■□□□□ 0.7
GPC1-207ENST00000466624 DZIP1Q86YF9 867 aaKnown RBP19.42■□□□□ 0.7
GPC1-207ENST00000466624 TEKT1Q969V4 418 aa19.42■□□□□ 0.7
GPC1-207ENST00000466624 NSUN4Q96CB9 384 aaKnown RBP19.42■□□□□ 0.7
GPC1-207ENST00000466624 RRAGCQ9HB90 399 aa19.42■□□□□ 0.7
GPC1-207ENST00000466624 MYOZ2Q9NPC6 264 aa19.42■□□□□ 0.7
GPC1-207ENST00000466624 RAI14Q9P0K7 980 aa19.42■□□□□ 0.7
GPC1-207ENST00000466624 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
GPC1-207ENST00000466624 GSTO1P78417 241 aa19.41■□□□□ 0.7
GPC1-207ENST00000466624 MECOMQ03112 1051 aa19.41■□□□□ 0.7
GPC1-207ENST00000466624 TICAM2Q86XR7 235 aa19.41■□□□□ 0.7
GPC1-207ENST00000466624 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
GPC1-207ENST00000466624 ZNF526Q8TF50 670 aaPredicted RBP19.41■□□□□ 0.7
GPC1-207ENST00000466624 EDC3Q96F86 508 aaKnown RBP19.41■□□□□ 0.7
GPC1-207ENST00000466624 FAM163AQ96GL9 167 aaPredicted RBP19.41■□□□□ 0.7
GPC1-207ENST00000466624 ZBED3Q96IU2 234 aaPredicted RBP19.41■□□□□ 0.7
GPC1-207ENST00000466624 NMRK2Q9NPI5 230 aa19.41■□□□□ 0.7
GPC1-207ENST00000466624 IDH1O75874 414 aaKnown RBP19.4■□□□□ 0.7
GPC1-207ENST00000466624 LDHCP07864 332 aa19.4■□□□□ 0.7
GPC1-207ENST00000466624 CRKP46108 304 aa19.4■□□□□ 0.7
GPC1-207ENST00000466624 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
GPC1-207ENST00000466624 EVI5LQ96CN4 794 aa19.4■□□□□ 0.7
GPC1-207ENST00000466624 ZDHHC15Q96MV8 337 aa19.4■□□□□ 0.7
GPC1-207ENST00000466624 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.4■□□□□ 0.7
GPC1-207ENST00000466624 GAKO14976 1311 aa19.4■□□□□ 0.7
GPC1-207ENST00000466624 DLGAP5Q15398 846 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 CFAP100Q494V2 611 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 TTC22Q5TAA0 569 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 ZSCAN25Q6NSZ9 544 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 SAMD7Q7Z3H4 446 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
GPC1-207ENST00000466624 ZNF384Q8TF68 577 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 GTF3C3Q9Y5Q9 886 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 RFX7Q2KHR2 1363 aa19.39■□□□□ 0.69
GPC1-207ENST00000466624 MROH7-TTC4A0A0A0MT08 1334 aa19.38■□□□□ 0.69
GPC1-207ENST00000466624 SPDYE2BA6NHP3 402 aa19.38■□□□□ 0.69
GPC1-207ENST00000466624 SPDYE6P0CI01 402 aa19.38■□□□□ 0.69
GPC1-207ENST00000466624 DIXDC1Q155Q3 683 aa19.38■□□□□ 0.69
GPC1-207ENST00000466624 LRRFIP1Q32MZ4 808 aaKnown RBP19.38■□□□□ 0.69
GPC1-207ENST00000466624 TBC1D10BQ4KMP7 808 aaPredicted RBP19.38■□□□□ 0.69
GPC1-207ENST00000466624 NAA16Q6N069 864 aaPredicted RBP19.38■□□□□ 0.69
GPC1-207ENST00000466624 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
GPC1-207ENST00000466624 TRPM4Q8TD43 1214 aa19.38■□□□□ 0.69
GPC1-207ENST00000466624 WNT10BO00744 389 aa19.37■□□□□ 0.69
GPC1-207ENST00000466624 EGFRP00533 1210 aa19.37■□□□□ 0.69
GPC1-207ENST00000466624 ZC3H15Q8WU90 426 aaKnown RBP19.37■□□□□ 0.69
GPC1-207ENST00000466624 DAGLAQ9Y4D2 1042 aa19.37■□□□□ 0.69
GPC1-207ENST00000466624 MAP4K4O95819 1239 aaPredicted RBP19.36■□□□□ 0.69
GPC1-207ENST00000466624 ZFYP08048 801 aaPredicted RBP19.36■□□□□ 0.69
GPC1-207ENST00000466624 GSPT1P15170 499 aaKnown RBP19.36■□□□□ 0.69
GPC1-207ENST00000466624 PDE6AP16499 860 aa19.36■□□□□ 0.69
GPC1-207ENST00000466624 ADD2P35612 726 aa19.36■□□□□ 0.69
GPC1-207ENST00000466624 RBM5P52756 815 aaKnown RBP eCLIP19.36■□□□□ 0.69
GPC1-207ENST00000466624 HIRAP54198 1017 aaPredicted RBP19.36■□□□□ 0.69
GPC1-207ENST00000466624 UBE3CQ15386 1083 aa19.36■□□□□ 0.69
GPC1-207ENST00000466624 SLC9C2Q5TAH2 1124 aa19.36■□□□□ 0.69
GPC1-207ENST00000466624 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
GPC1-207ENST00000466624 PGAP2Q9UHJ9 254 aa19.36■□□□□ 0.69
GPC1-207ENST00000466624 GPR75-ASB3A0A0A6YYF3 556 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 KIF3CO14782 793 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 MYO1BO43795 1136 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 RBM26Q5T8P6 1007 aaKnown RBP19.35■□□□□ 0.69
GPC1-207ENST00000466624 APOBEC3HQ6NTF7 200 aaKnown RBP19.35■□□□□ 0.69
GPC1-207ENST00000466624 CERS3Q8IU89 383 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 PRMT6Q96LA8 375 aaPredicted RBP19.35■□□□□ 0.69
GPC1-207ENST00000466624 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 POLR2AP24928 1970 aaKnown RBP19.35■□□□□ 0.69
GPC1-207ENST00000466624 CDK5RAP2Q96SN8 1893 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 FOCADQ5VW36 1801 aa19.35■□□□□ 0.69
GPC1-207ENST00000466624 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
GPC1-207ENST00000466624 TRIM6-TRIM34B2RNG4 842 aa19.34■□□□□ 0.69
GPC1-207ENST00000466624 CYP7A1P22680 504 aa19.34■□□□□ 0.69
GPC1-207ENST00000466624 RGS3P49796 1198 aa19.34■□□□□ 0.69
GPC1-207ENST00000466624 NBPF9Q3BBW0 867 aa19.34■□□□□ 0.69
GPC1-207ENST00000466624 LDHDQ86WU2 507 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms