RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 UBXN4Q92575 508 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 GPRASP2Q96D09 838 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 SEC16BQ96JE7 1060 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 TANGO6Q9C0B7 1094 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 OSGEPQ9NPF4 335 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 PRKAG2Q9UGJ0 569 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 ADAMTS1Q9UHI8 967 aa6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 SUPT16HQ9Y5B9 1047 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-211ENST00000466538 GREM1O60565 184 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 PAGE1O75459 146 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 ALBP02768 609 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 PF4P02776 101 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 ATP2B1P20020 1258 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 EPHA1P21709 976 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 BAG6P46379 1132 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 ZNF157P51786 506 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 AP3B2Q13367 1082 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 FBXL19Q6PCT2 694 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 C1orf229Q6ZS94 237 aaPredicted RBP6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 CHSY3Q70JA7 882 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 TLR6Q9Y2C9 796 aa6.83□□□□□ -1.32
CDC42BPA-211ENST00000466538 M0R082 166 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 TFE3P19532 575 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 GARTP22102 1010 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 C19orf57Q0VDD7 668 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 MSL1Q68DK7 614 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 WFDC8Q8IUA0 241 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 MAP4K3Q8IVH8 894 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 ZNF417Q8TAU3 575 aa6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 ZNF587Q96SQ5 575 aaPredicted RBP6.82□□□□□ -1.32
CDC42BPA-211ENST00000466538 CYP11A1P05108 521 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 SNAP47Q5SQN1 464 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 KLHL23Q8NBE8 558 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 GOLM1Q8NBJ4 401 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 DCAF11Q8TEB1 546 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 EAF1Q96JC9 268 aaPredicted RBP6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 MIR1-1HGQ9H1L0 117 aa6.81□□□□□ -1.32
CDC42BPA-211ENST00000466538 FSCN2O14926 492 aa6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 CELA2BP08218 269 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 HNRNPUQ00839 825 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 LLGL2Q6P1M3 1020 aa6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 FAM196AQ6ZSG2 479 aa6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 GATAD2BQ8WXI9 593 aa6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 ENAMQ9NRM1 1142 aa6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
CDC42BPA-211ENST00000466538 SHROOM4Q9ULL8 1493 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 F6X3S4 739 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 LINC01387J3KSC0 135 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 WFS1O76024 890 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 TRIM37O94972 964 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 AMPD1P23109 780 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 GSTM4Q03013 218 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 FAM160A1Q05DH4 1040 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 RBL2Q08999 1139 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 ZNF252P-AS1Q0IIN9 211 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 SOGA3Q5TF21 947 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 SLITRK4Q8IW52 837 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 LRRC3Q9BY71 257 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 CBX8Q9HC52 389 aa6.79□□□□□ -1.32
CDC42BPA-211ENST00000466538 FAM221AA4D161 298 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 SHISA8B8ZZ34 492 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 GSTP1P09211 210 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 GMPRP36959 345 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 APOBRQ0VD83 1088 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 MPP2Q14168 576 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 SUZ12Q15022 739 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 LYPD4Q6UWN0 246 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 PDZD3Q86UT5 571 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 NKD1Q969G9 470 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 KRT82Q9NSB4 513 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 CACNA2D2Q9NY47 1150 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 STRIP2Q9ULQ0 834 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 PCDHB5Q9Y5E4 795 aa6.78□□□□□ -1.32
CDC42BPA-211ENST00000466538 CILPO75339 1184 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 FGRP09769 529 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 NID1P14543 1247 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 CDC25BP30305 580 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 SOX9P48436 509 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 COL9A3Q14050 684 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 POU4F3Q15319 338 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 GRIN3AQ8TCU5 1115 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 STK35Q8TDR2 534 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 HIRIP3Q9BW71 556 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-211ENST00000466538 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 SETDB1Q15047 1291 aa6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 CWF19L2Q2TBE0 894 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 BNC2Q6ZN30 1099 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-211ENST00000466538 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms