RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 STRBPQ96SI9 672 aaKnown RBP23.88■■□□□ 1.41
TUBGCP3-204ENST00000464139 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.88■■□□□ 1.414e-8■■■□□ 18.2
TUBGCP3-204ENST00000464139 BCAMP50895 628 aa23.87■■□□□ 1.41
TUBGCP3-204ENST00000464139 ZNF830Q96NB3 372 aaPredicted RBP23.87■■□□□ 1.41
TUBGCP3-204ENST00000464139 INCENPQ9NQS7 918 aa23.87■■□□□ 1.41
TUBGCP3-204ENST00000464139 IGHMBP2P38935 993 aaKnown RBP23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 GJB4Q9NTQ9 266 aa23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 CPLX1O14810 134 aa23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 DHX16O60231 1041 aaKnown RBP23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 OFD1O75665 1012 aa23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 ZNF396Q96N95 335 aaPredicted RBP23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 ORC3Q9UBD5 711 aaPredicted RBP23.86■■□□□ 1.41
TUBGCP3-204ENST00000464139 DDX60Q8IY21 1712 aaKnown RBP23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 B4E1Z4 1266 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 ANO6Q4KMQ2 910 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 RBM43Q6ZSC3 357 aaKnown RBP23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 FAM200AQ8TCP9 573 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 ARAP2Q8WZ64 1704 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 MBD4O95243 580 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 KCNQ4P56696 695 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 MAP3K12Q12852 859 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 LUZP1Q86V48 1076 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 CCAR1Q8IX12 1150 aaKnown RBP23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 C8orf76Q96K31 380 aa23.85■■□□□ 1.41
TUBGCP3-204ENST00000464139 WDR19Q8NEZ3 1342 aa23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 GOLPH3LQ9H4A5 285 aa23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 ARMT1Q9H993 441 aa23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 SENP2Q9HC62 589 aa23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 RXRAP19793 462 aa23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 EPB41L4AQ9HCS5 686 aaPredicted RBP23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 ANGEL1Q9UNK9 670 aaKnown RBP23.84■■□□□ 1.41
TUBGCP3-204ENST00000464139 NEDD4P46934 1319 aa23.83■■□□□ 1.41
TUBGCP3-204ENST00000464139 CHRNDQ07001 517 aa23.83■■□□□ 1.41
TUBGCP3-204ENST00000464139 BARGINQ6ZT62 677 aa23.83■■□□□ 1.4
TUBGCP3-204ENST00000464139 IFNL3Q8IZI9 196 aa23.83■■□□□ 1.4
TUBGCP3-204ENST00000464139 RREB1Q92766 1687 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 POLR3DP05423 398 aaPredicted RBP23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 ME1P48163 572 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 IQSEC3Q9UPP2 1182 aaPredicted RBP23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 PATL2C9JE40 543 aaKnown RBP23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 SH2B2O14492 632 aaPredicted RBP23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 CTDSPL2Q05D32 466 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 ATL3Q6DD88 541 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 SASS6Q6UVJ0 657 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 FBXO18Q8NFZ0 1043 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 CBX8Q9HC52 389 aa23.82■■□□□ 1.4
TUBGCP3-204ENST00000464139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 PRKAB2O43741 272 aa23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 TTC12Q9H892 705 aaPredicted RBP23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 COL4A1P02462 1669 aa23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 FAM98CQ17RN3 349 aaKnown RBP23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 SMIM5Q71RC9 77 aa23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 SMARCC1Q92922 1105 aaPredicted RBP23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 NAPBQ9H115 298 aa23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 TAOK2Q9UL54 1235 aa23.81■■□□□ 1.4
TUBGCP3-204ENST00000464139 C3orf67Q6ZVT6 689 aa23.8■■□□□ 1.4
TUBGCP3-204ENST00000464139 LINC00116Q8NCU8 138 aa23.8■■□□□ 1.4
TUBGCP3-204ENST00000464139 WTIPA6NIX2 430 aaPredicted RBP23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 METAP2P50579 478 aaKnown RBP eCLIP23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 ALX1Q15699 326 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 ERFEQ4G0M1 354 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 CCDC144CPQ8IYA2 1237 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 AIFM3Q96NN9 605 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 ZNF652Q9Y2D9 606 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 TACC3Q9Y6A5 838 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 SNW1Q13573 536 aaKnown RBP23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 DNAJC25Q9H1X3 360 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 DOCK2Q92608 1830 aa23.79■■□□□ 1.4
TUBGCP3-204ENST00000464139 GSG1L2A8MUP6 293 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 CCDC73Q6ZRK6 1079 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 LCORLQ8N3X6 602 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 PCDHA7Q9UN72 937 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 CLIC4Q9Y696 253 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 ZMYM6O95789 1325 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 APOA5Q6Q788 366 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 BICDL1Q6ZP65 573 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 MICU3Q86XE3 530 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 FSIP1Q8NA03 581 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 MIGA1Q8NAN2 632 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 IGDCC4Q8TDY8 1250 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 RTEL1Q9NZ71 1219 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 C4AP0C0L4 1744 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 C4BP0C0L5 1744 aa23.78■■□□□ 1.4
TUBGCP3-204ENST00000464139 KIF28PB7ZC32 967 aa23.77■■□□□ 1.4
TUBGCP3-204ENST00000464139 CDC27P30260 824 aa23.77■■□□□ 1.4
TUBGCP3-204ENST00000464139 SPC24Q8NBT2 197 aa23.77■■□□□ 1.4
TUBGCP3-204ENST00000464139 MYL10Q9BUA6 226 aa23.77■■□□□ 1.4
TUBGCP3-204ENST00000464139 LRP2BPQ9P2M1 347 aa23.77■■□□□ 1.4
TUBGCP3-204ENST00000464139 NFXL1Q6ZNB6 911 aa23.77■■□□□ 1.4
TUBGCP3-204ENST00000464139 KIAA2012Q0VF49 1180 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 TMEM67Q5HYA8 995 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 STK11IPQ8N1F8 1099 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 ENGASEQ8NFI3 743 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 PHKBQ93100 1093 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 LY9Q9HBG7 655 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 ZSWIM5Q9P217 1185 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 SLC4A4Q9Y6R1 1079 aa23.76■■□□□ 1.39
TUBGCP3-204ENST00000464139 ZNF165P49910 485 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms