RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ATP2B3Q16720 1220 aa24■■□□□ 1.43
CCHCR1-210ENST00000464012 FBXO3Q9UK99 471 aa24■■□□□ 1.43
CCHCR1-210ENST00000464012 PPP2R3BQ9Y5P8 575 aa24■■□□□ 1.43
CCHCR1-210ENST00000464012 DZIP1LQ8IYY4 767 aaKnown RBP23.99■■□□□ 1.43
CCHCR1-210ENST00000464012 CSRNP1Q96S65 589 aa23.99■■□□□ 1.43
CCHCR1-210ENST00000464012 ZNF70Q9UC06 446 aaPredicted RBP23.99■■□□□ 1.43
CCHCR1-210ENST00000464012 SRGAP3O43295 1099 aa23.98■■□□□ 1.43
CCHCR1-210ENST00000464012 TRPA1O75762 1119 aa23.98■■□□□ 1.43
CCHCR1-210ENST00000464012 IL15P40933 162 aaPredicted RBP23.98■■□□□ 1.43
CCHCR1-210ENST00000464012 SPDYE2Q495Y8 402 aa23.98■■□□□ 1.43
CCHCR1-210ENST00000464012 RASA3Q14644 834 aa23.97■■□□□ 1.43
CCHCR1-210ENST00000464012 ZKSCAN2Q63HK3 967 aa23.97■■□□□ 1.43
CCHCR1-210ENST00000464012 COPRSQ9NQ92 184 aa23.97■■□□□ 1.43
CCHCR1-210ENST00000464012 TCP10L2B9ZVM9 353 aa23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 TNFAIP1Q13829 316 aa23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 NBPF12Q5TAG4 269 aaPredicted RBP23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 TMEM57Q8N5G2 664 aa23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 TEKT1Q969V4 418 aa23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 RNF186Q9NXI6 227 aa23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 SAGE1Q9NXZ1 904 aa23.96■■□□□ 1.43
CCHCR1-210ENST00000464012 ZBED9Q6R2W3 1325 aa23.95■■□□□ 1.42
CCHCR1-210ENST00000464012 MAST3O60307 1309 aa23.94■■□□□ 1.42
CCHCR1-210ENST00000464012 PPP1R12BO60237 982 aaPredicted RBP23.94■■□□□ 1.42
CCHCR1-210ENST00000464012 GNAI2P04899 355 aa23.94■■□□□ 1.42
CCHCR1-210ENST00000464012 SUPT20HL1Q3ZLR7 823 aa23.94■■□□□ 1.42
CCHCR1-210ENST00000464012 ADORA1P30542 326 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 PHKA1P46020 1223 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 CACNB3P54284 484 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 MTX1Q13505 466 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 LDLRAD1Q5T700 205 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 REM2Q8IYK8 340 aaPredicted RBP23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 WDR66Q8TBY9 1149 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 LAMB1P07942 1786 aa23.93■■□□□ 1.42
CCHCR1-210ENST00000464012 HDLBPQ00341 1268 aaKnown RBP23.92■■□□□ 1.42
CCHCR1-210ENST00000464012 CDAN1Q8IWY9 1227 aa23.92■■□□□ 1.42
CCHCR1-210ENST00000464012 CLMNQ96JQ2 1002 aa23.92■■□□□ 1.42
CCHCR1-210ENST00000464012 GNL3LQ9NVN8 582 aaKnown RBP23.92■■□□□ 1.42
CCHCR1-210ENST00000464012 AK9Q5TCS8 1911 aa23.92■■□□□ 1.42
CCHCR1-210ENST00000464012 MYH2Q9UKX2 1941 aa23.92■■□□□ 1.42
CCHCR1-210ENST00000464012 TNNI2P48788 182 aa23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 TFCP2Q12800 502 aa23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 MAP3K11Q16584 847 aa23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 FTSJ3Q8IY81 847 aaKnown RBP23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 ABHD8Q96I13 439 aa23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 TMEM39BQ9GZU3 492 aa23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 SUGT1Q9Y2Z0 365 aa23.91■■□□□ 1.42
CCHCR1-210ENST00000464012 PNMA6EA0A0J9YXQ4 647 aa23.9■■□□□ 1.42
CCHCR1-210ENST00000464012 SPRYD7Q5W111 196 aa23.9■■□□□ 1.42
CCHCR1-210ENST00000464012 SLC10A4Q96EP9 437 aa23.9■■□□□ 1.42
CCHCR1-210ENST00000464012 ZDHHC15Q96MV8 337 aa23.9■■□□□ 1.42
CCHCR1-210ENST00000464012 TMOD2Q9NZR1 351 aa23.9■■□□□ 1.42
CCHCR1-210ENST00000464012 PRDX5P30044 214 aa23.89■■□□□ 1.41
CCHCR1-210ENST00000464012 IREB2P48200 963 aaKnown RBP23.89■■□□□ 1.41
CCHCR1-210ENST00000464012 TIMM10P62072 90 aa23.89■■□□□ 1.41
CCHCR1-210ENST00000464012 A0A1B0GUL7 405 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 USP2O75604 605 aaPredicted RBP23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 SREBF2Q12772 1141 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 DGKZQ13574 1117 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 CCDC102BQ68D86 513 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 ITPRIPQ8IWB1 547 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 TEPSINQ96N21 525 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 DENND2AQ9ULE3 1009 aa23.88■■□□□ 1.41
CCHCR1-210ENST00000464012 DIXDC1Q155Q3 683 aa23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 APOBEC3HQ6NTF7 200 aaKnown RBP23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 WNK4Q96J92 1243 aa23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 MCOLN1Q9GZU1 580 aa23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 C1orf115Q9H7X2 142 aa23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 AKAP2Q9Y2D5 859 aa23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.87■■□□□ 1.41
CCHCR1-210ENST00000464012 SEMA3EO15041 775 aa23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 TBC1D8O95759 1140 aa23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 LDHBP07195 334 aaKnown RBP23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 HHIPL2Q6UWX4 724 aa23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 XAGE2Q96GT9 111 aa23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 NEUROD6Q96NK8 337 aa23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 MRIQ9BWK5 157 aa23.86■■□□□ 1.41
CCHCR1-210ENST00000464012 RLBP1P12271 317 aa23.85■■□□□ 1.41
CCHCR1-210ENST00000464012 TM4SF4P48230 202 aa23.85■■□□□ 1.41
CCHCR1-210ENST00000464012 RASGRF1Q13972 1273 aa23.85■■□□□ 1.41
CCHCR1-210ENST00000464012 ANKRD13AQ8IZ07 590 aa23.85■■□□□ 1.41
CCHCR1-210ENST00000464012 DAGLAQ9Y4D2 1042 aa23.85■■□□□ 1.41
CCHCR1-210ENST00000464012 G3BP1Q13283 466 aaKnown RBP eCLIP23.84■■□□□ 1.41
CCHCR1-210ENST00000464012 ELP3Q9H9T3 547 aa23.84■■□□□ 1.41
CCHCR1-210ENST00000464012 SALL1Q9NSC2 1324 aa23.84■■□□□ 1.41
CCHCR1-210ENST00000464012 ZBTB48P10074 688 aaPredicted RBP23.83■■□□□ 1.41
CCHCR1-210ENST00000464012 MVPQ14764 893 aaKnown RBP23.83■■□□□ 1.41
CCHCR1-210ENST00000464012 DOCK2Q92608 1830 aa23.82■■□□□ 1.4
CCHCR1-210ENST00000464012 MANSC4A6NHS7 340 aaPredicted RBP23.82■■□□□ 1.4
CCHCR1-210ENST00000464012 CCDC85CA6NKD9 419 aa23.82■■□□□ 1.4
CCHCR1-210ENST00000464012 GJA5P36382 358 aa23.82■■□□□ 1.4
CCHCR1-210ENST00000464012 ABCF2Q9UG63 623 aa23.82■■□□□ 1.4
CCHCR1-210ENST00000464012 UNCXA6NJT0 531 aa23.81■■□□□ 1.4
CCHCR1-210ENST00000464012 GORABQ5T7V8 394 aa23.81■■□□□ 1.4
CCHCR1-210ENST00000464012 FAM83AQ86UY5 434 aa23.81■■□□□ 1.4
CCHCR1-210ENST00000464012 ZGPATQ8N5A5 531 aaKnown RBP23.81■■□□□ 1.4
CCHCR1-210ENST00000464012 OPTNQ96CV9 577 aa23.81■■□□□ 1.4
CCHCR1-210ENST00000464012 TCP10Q12799 353 aa23.8■■□□□ 1.4
CCHCR1-210ENST00000464012 OS9Q13438 667 aaPredicted RBP23.8■■□□□ 1.4
CCHCR1-210ENST00000464012 CDC42EP5Q6NZY7 148 aa23.8■■□□□ 1.4
CCHCR1-210ENST00000464012 DZIP1Q86YF9 867 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms