RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 ZC3H15Q8WU90 426 aaKnown RBP7.76□□□□□ -1.17
SF3B1-206ENST00000462613 DCPSQ96C86 337 aaKnown RBP7.76□□□□□ -1.17
SF3B1-206ENST00000462613 DNAJC2Q99543 621 aaKnown RBP7.76□□□□□ -1.17
SF3B1-206ENST00000462613 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.76□□□□□ -1.172e-7■□□□□ 9.3
SF3B1-206ENST00000462613 MYOZ2Q9NPC6 264 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 RAI14Q9P0K7 980 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
SF3B1-206ENST00000462613 GLRX3O76003 335 aaKnown RBP7.75□□□□□ -1.17
SF3B1-206ENST00000462613 IGHDP01880 384 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 ATP5JP18859 108 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 ZNF280AP59817 542 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-206ENST00000462613 TNFAIP1Q13829 316 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 TBC1D10BQ4KMP7 808 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-206ENST00000462613 ZSCAN25Q6NSZ9 544 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 CERS3Q8IU89 383 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 RBM46Q8TBY0 533 aaKnown RBP7.75□□□□□ -1.17
SF3B1-206ENST00000462613 GMLQ99445 158 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 LNPKQ9C0E8 428 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 TLR7Q9NYK1 1049 aaKnown RBP7.75□□□□□ -1.17
SF3B1-206ENST00000462613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.75□□□□□ -1.17
SF3B1-206ENST00000462613 CDK5RAP2Q96SN8 1893 aa7.75□□□□□ -1.17
SF3B1-206ENST00000462613 ADAMTSL1Q8N6G6 1762 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 MYH1P12882 1939 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 MYH8P13535 1937 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 FOCADQ5VW36 1801 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 KIF3CO14782 793 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 IDH1O75874 414 aaKnown RBP7.74□□□□□ -1.17
SF3B1-206ENST00000462613 BAG3O95817 575 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 PLCG2P16885 1265 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 CRKP46108 304 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 TNNI2P48788 182 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 NUCB1Q02818 461 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 CFAP100Q494V2 611 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 NAA16Q6N069 864 aaPredicted RBP7.74□□□□□ -1.17
SF3B1-206ENST00000462613 CHADLQ6NUI6 762 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 HHIPL2Q6UWX4 724 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 SAMD7Q7Z3H4 446 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 APOBEC3FQ8IUX4 373 aaKnown RBP7.74□□□□□ -1.17
SF3B1-206ENST00000462613 SULF1Q8IWU6 871 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 CERS5Q8N5B7 392 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 MXD3Q9BW11 206 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 MRIQ9BWK5 157 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 BOLA2Q9H3K6 86 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 SNRKQ9NRH2 765 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 PAG1Q9NWQ8 432 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 PPP4R2Q9NY27 417 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 AOX1Q06278 1338 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 PITPNM2Q9BZ72 1349 aa7.74□□□□□ -1.17
SF3B1-206ENST00000462613 COL1A1P02452 1464 aaPredicted RBP7.74□□□□□ -1.17
SF3B1-206ENST00000462613 POTECB2RU33 542 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 GOLIM4O00461 696 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 WNT10BO00744 389 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 MAP4K4O95819 1239 aaPredicted RBP7.73□□□□□ -1.17
SF3B1-206ENST00000462613 PRDX5P30044 214 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 NF2P35240 595 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 ZAP70P43403 619 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 FSTL1Q12841 308 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 SCARF1Q14162 830 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 PI16Q6UXB8 463 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 CDC37L1Q7L3B6 337 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 MTMR14Q8NCE2 650 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 HAUS7Q99871 368 aa7.73□□□□□ -1.17
SF3B1-206ENST00000462613 UTRNP46939 3433 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 SPDYE2BA6NHP3 402 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 TRIM6-TRIM34B2RNG4 842 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 CYP2E1P05181 493 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-206ENST00000462613 ZFYP08048 801 aaPredicted RBP7.72□□□□□ -1.17
SF3B1-206ENST00000462613 SPDYE6P0CI01 402 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 PDE1AP54750 535 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 MECOMQ03112 1051 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 ANGEL2Q5VTE6 544 aaKnown RBP7.72□□□□□ -1.17
SF3B1-206ENST00000462613 TBC1D9Q6ZT07 1266 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 KRT26Q7Z3Y9 468 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 CNTROBQ8N137 903 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 HOOK2Q96ED9 719 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 ZDHHC15Q96MV8 337 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 VEZTQ9HBM0 779 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 GGA3Q9NZ52 723 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 NAV1Q8NEY1 1877 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 MROH7-TTC4A0A0A0MT08 1334 aa7.72□□□□□ -1.17
SF3B1-206ENST00000462613 SHTN1A0MZ66 631 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 CYP7A1P22680 504 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 DIXDC1Q155Q3 683 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 SLC9C2Q5TAH2 1124 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 MAP1SQ66K74 1059 aaPredicted RBP7.71□□□□□ -1.18
SF3B1-206ENST00000462613 TICAM2Q86XR7 235 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 MAGEB6Q8N7X4 407 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 NSUN4Q96CB9 384 aaKnown RBP7.71□□□□□ -1.18
SF3B1-206ENST00000462613 EVI5LQ96CN4 794 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 FAM163AQ96GL9 167 aaPredicted RBP7.71□□□□□ -1.18
SF3B1-206ENST00000462613 DDRGK1Q96HY6 314 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 FSD1Q9BTV5 496 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 STAP2Q9UGK3 403 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 PGAP2Q9UHJ9 254 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 DAGLAQ9Y4D2 1042 aa7.71□□□□□ -1.18
SF3B1-206ENST00000462613 PPP2R3BQ9Y5P8 575 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms