RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NBPF26B4DH59 902 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 KIF2AO00139 706 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 CYP27B1O15528 508 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 YEATS4O95619 227 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 RXRAP19793 462 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 ADORA1P30542 326 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 ARHGAP29Q52LW3 1261 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 NBPF10Q6P3W6 841 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 NBPF15Q8N660 670 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 FHOD1Q9Y613 1164 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 TMEM232C9JQI7 657 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 H7C1W4 665 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 KIF23Q02241 960 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 SCARF1Q14162 830 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 HSP90AA4PQ58FG1 418 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 ANO1Q5XXA6 986 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 EPC1Q9H2F5 836 aa13.6□□□□□ -0.23
PDZRN3-203ENST00000462146 MYO5AQ9Y4I1 1855 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 LAMB4A4D0S4 1761 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 FGAP02671 866 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 HSPA2P54652 639 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 EVCP57679 992 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 PNOCQ13519 176 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 MB21D2Q8IYB1 491 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 MYH7P12883 1935 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 PUS7LQ9H0K6 701 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-203ENST00000462146 IL15P40933 162 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 KRT28Q7Z3Y7 464 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 IFNL2Q8IZJ0 200 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 FAM177A1Q8N128 213 aaPredicted RBP13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 CLIC6Q96NY7 704 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 TMX1Q9H3N1 280 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 ZBTB3Q9H5J0 574 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 EYA2O00167 538 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 CPLX1O14810 134 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 SPEF2Q9C093 1822 aa13.58□□□□□ -0.24
PDZRN3-203ENST00000462146 UBE2Q2LH0YL09 131 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 SHC4Q6S5L8 630 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 SEC31AO94979 1220 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 PNMA6AP0CW24 399 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 CMA1P23946 247 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 PLA2G4AP47712 749 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 UBASH3AP57075 661 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 IMMTQ16891 758 aaKnown RBP13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 BRAPQ7Z569 592 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 PODXL2Q9NZ53 605 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 SERPINC1P01008 464 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 SYKP43405 635 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 TPM4P67936 248 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 CFAP100Q494V2 611 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 REXO1L1PQ8IX06 675 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 GPR108Q9NPR9 543 aa13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
PDZRN3-203ENST00000462146 CDC27P30260 824 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 PHKBQ93100 1093 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 CARD6Q9BX69 1037 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 NBPF3Q9H094 633 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 STRCQ7RTU9 1775 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 FOXN1O15353 648 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 URI1O94763 535 aaPredicted RBP13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 A1BGP04217 495 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 INTS13Q9NVM9 706 aa13.56□□□□□ -0.24
PDZRN3-203ENST00000462146 IKBKBO14920 756 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 ZAP70P43403 619 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 KCNJ6P48051 423 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 CABP4P57796 275 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 PDE4BQ07343 736 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 SLC39A14Q15043 492 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 SPECC1Q5M775 1068 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 VPS37DQ86XT2 251 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 CABLES1Q8TDN4 633 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 NOL10Q9BSC4 688 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 TUBE1Q9UJT0 475 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 PHLPP2Q6ZVD8 1323 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 METTL16Q86W50 562 aaKnown RBP13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 NCOA7Q8NI08 942 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 XAGE2Q96GT9 111 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 ALG1Q9BT22 464 aa13.55□□□□□ -0.24
PDZRN3-203ENST00000462146 PARP3Q9Y6F1 533 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms