RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 HOXB7P09629 217 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 LMOD1P29536 600 aaPredicted RBP17.9■□□□□ 0.46
SSR4-206ENST00000460616 NLRP12P59046 1061 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 GUCY1B3Q02153 619 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
SSR4-206ENST00000460616 NCAPHQ15003 741 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
SSR4-206ENST00000460616 KAT6BQ8WYB5 2073 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 SIPA1L3O60292 1781 aaPredicted RBP17.9■□□□□ 0.46
SSR4-206ENST00000460616 ZSCAN12O43309 604 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 CYP21A2P08686 494 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
SSR4-206ENST00000460616 GOLGA5Q8TBA6 731 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 EDC3Q96F86 508 aaKnown RBP17.9■□□□□ 0.46
SSR4-206ENST00000460616 LCMT1Q9UIC8 334 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
SSR4-206ENST00000460616 TRIM66O15016 1216 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
SSR4-206ENST00000460616 SF3A1Q15459 793 aaKnown RBP17.89■□□□□ 0.45
SSR4-206ENST00000460616 IFNL2Q8IZJ0 200 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 FAM177A1Q8N128 213 aaPredicted RBP17.89■□□□□ 0.45
SSR4-206ENST00000460616 FBXO18Q8NFZ0 1043 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 TMX1Q9H3N1 280 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 ADAM21Q9UKJ8 722 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 THRAP3Q9Y2W1 955 aaKnown RBP17.89■□□□□ 0.45
SSR4-206ENST00000460616 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 THSD7AQ9UPZ6 1657 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 TNS2Q63HR2 1409 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 GYS2P54840 703 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 CCT2P78371 535 aaKnown RBP17.89■□□□□ 0.45
SSR4-206ENST00000460616 EXOC4Q96A65 974 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 MPHOSPH8Q99549 860 aa17.89■□□□□ 0.45
SSR4-206ENST00000460616 RNMTO43148 476 aaKnown RBP17.88■□□□□ 0.45
SSR4-206ENST00000460616 CWF19L2Q2TBE0 894 aaKnown RBP17.88■□□□□ 0.45
SSR4-206ENST00000460616 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
SSR4-206ENST00000460616 SEC62Q99442 399 aaKnown RBP17.88■□□□□ 0.45
SSR4-206ENST00000460616 FUT8Q9BYC5 575 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 PSD3Q9NYI0 1048 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 CASQ1P31415 396 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 MAP3K9P80192 1104 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 APOBRQ0VD83 1088 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 QTRT2Q9H974 415 aaKnown RBP17.88■□□□□ 0.45
SSR4-206ENST00000460616 COL15A1P39059 1388 aa17.88■□□□□ 0.45
SSR4-206ENST00000460616 IKBKBO14920 756 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 HMGB1P09429 215 aaKnown RBP17.87■□□□□ 0.45
SSR4-206ENST00000460616 ATP1A3P13637 1013 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 LMAN1P49257 510 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 UBASH3AP57075 661 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
SSR4-206ENST00000460616 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
SSR4-206ENST00000460616 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 A0A0G2JS52 829 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 VWA3AA6NCI4 1184 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 SERPINC1P01008 464 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
SSR4-206ENST00000460616 STK38Q15208 465 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 CCDC129Q6ZRS4 1044 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 FCHSD1Q86WN1 690 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 LINC00301Q8NCQ3 95 aa17.87■□□□□ 0.45
SSR4-206ENST00000460616 CBFA2T2O43439 604 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 GNG11P61952 73 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 PPP2R3AQ06190 1150 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 RSRC2Q7L4I2 434 aaKnown RBP17.86■□□□□ 0.45
SSR4-206ENST00000460616 CERS3Q8IU89 383 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 BICC1Q9H694 974 aaKnown RBP17.86■□□□□ 0.45
SSR4-206ENST00000460616 NCOA5Q9HCD5 579 aaKnown RBP17.86■□□□□ 0.45
SSR4-206ENST00000460616 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
SSR4-206ENST00000460616 EXOC5O00471 708 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 KCNQ3O43525 872 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 ZNF202O95125 648 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 DDB1Q16531 1140 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 ISM2Q6H9L7 571 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 KSR2Q6VAB6 950 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 SRLQ86TD4 932 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 PPP2R2CQ9Y2T4 447 aa17.86■□□□□ 0.45
SSR4-206ENST00000460616 ITGB4P16144 1822 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 NEDD4P46934 1319 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 CFAP100Q494V2 611 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 KCNG4Q8TDN1 519 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 RABGGTAQ92696 567 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 KAZALD1Q96I82 304 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 CLIC4Q9Y696 253 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 KDM3BQ7LBC6 1761 aa17.85■□□□□ 0.45
SSR4-206ENST00000460616 ACTN2P35609 894 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 NOP2P46087 812 aaKnown RBP17.84■□□□□ 0.45
SSR4-206ENST00000460616 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 DPF2Q92785 391 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 WDR24Q96S15 920 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 HSD3B7Q9H2F3 369 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 RRP15Q9Y3B9 282 aaKnown RBP17.84■□□□□ 0.45
SSR4-206ENST00000460616 GRM8O00222 908 aa17.84■□□□□ 0.45
SSR4-206ENST00000460616 ARHGAP6O43182 974 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms