RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SURF6O75683 361 aaKnown RBP6.1□□□□□ -1.43
RIF1-207ENST00000454583 SLC5A1P13866 664 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 EXOSC10Q01780 885 aaKnown RBP6.1□□□□□ -1.43
RIF1-207ENST00000454583 MSL1Q68DK7 614 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 SHISA4Q96DD7 197 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 TEPSINQ96N21 525 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 NLRP3Q96P20 1036 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 PUS7LQ9H0K6 701 aaKnown RBP6.1□□□□□ -1.43
RIF1-207ENST00000454583 CD209Q9NNX6 404 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 IL1RAPL2Q9NP60 686 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 SUGT1Q9Y2Z0 365 aa6.1□□□□□ -1.43
RIF1-207ENST00000454583 ZNFX1Q9P2E3 1918 aaKnown RBP6.09□□□□□ -1.43
RIF1-207ENST00000454583 ZC3H4Q9UPT8 1303 aaKnown RBP6.09□□□□□ -1.43
RIF1-207ENST00000454583 GPR75-ASB3A0A0A6YYF3 556 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 ATP2B4P23634 1241 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 ZAP70P43403 619 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 APOBEC3HQ6NTF7 200 aaKnown RBP6.09□□□□□ -1.43
RIF1-207ENST00000454583 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.09□□□□□ -1.43
RIF1-207ENST00000454583 ANKRD2Q9GZV1 360 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 DNAJC18Q9H819 358 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 WWC3Q9ULE0 1092 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 PALD1Q9ULE6 856 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 NDUFB9Q9Y6M9 179 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 HMMRO75330 724 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 SPATA5Q8NB90 893 aa6.09□□□□□ -1.43
RIF1-207ENST00000454583 ST5P78524 1137 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 EVI5LQ96CN4 794 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 HDAC5Q9UQL6 1122 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 WDR19Q8NEZ3 1342 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 ZNF541Q9H0D2 1346 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 GSG1L2A8MUP6 293 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 GLRX3O76003 335 aaKnown RBP6.08□□□□□ -1.44
RIF1-207ENST00000454583 ATP2B3Q16720 1220 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 ANKRD45Q5TZF3 282 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 VPS53Q5VIR6 699 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 ANKRD18AQ8IVF6 992 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 FAM227BQ96M60 508 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 STRBPQ96SI9 672 aaKnown RBP6.08□□□□□ -1.44
RIF1-207ENST00000454583 SYT17Q9BSW7 474 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 CCDC8Q9H0W5 538 aaPredicted RBP6.08□□□□□ -1.44
RIF1-207ENST00000454583 HELLSQ9NRZ9 838 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 ALDH1B1P30837 517 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 HDLBPQ00341 1268 aaKnown RBP6.08□□□□□ -1.44
RIF1-207ENST00000454583 GPR101Q96P66 508 aaPredicted RBP6.08□□□□□ -1.44
RIF1-207ENST00000454583 CASP8AP2Q9UKL3 1982 aa6.08□□□□□ -1.44
RIF1-207ENST00000454583 GYG1P46976 350 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 SCNN1DP51172 638 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 ANTXR2P58335 489 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 CC2D2BQ6DHV5 1058 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 LDHAL6AQ6ZMR3 332 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 C2CD5Q86YS7 1000 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 RASEFQ8IZ41 740 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 COA1Q9GZY4 146 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 PAG1Q9NWQ8 432 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 TAOK2Q9UL54 1235 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 PCDHAC2Q9Y5I4 1007 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 PARP3Q9Y6F1 533 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 WDHD1O75717 1129 aaPredicted RBP6.07□□□□□ -1.44
RIF1-207ENST00000454583 CCDC57Q2TAC2 916 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 SBK1Q52WX2 424 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 AACSQ86V21 672 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 SEC62Q99442 399 aaKnown RBP6.07□□□□□ -1.44
RIF1-207ENST00000454583 DSCC1Q9BVC3 393 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 IDI2Q9BXS1 227 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 TBC1D2Q9BYX2 928 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 AKAP2Q9Y2D5 859 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 ZBTB7AO95365 584 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 IGHA2P01877 340 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 MMP14P50281 582 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 NMIQ13287 307 aaPredicted RBP6.07□□□□□ -1.44
RIF1-207ENST00000454583 RRP1BQ14684 758 aaKnown RBP6.07□□□□□ -1.44
RIF1-207ENST00000454583 SLC35G1Q2M3R5 365 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 SIAH1Q8IUQ4 282 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 ANKS1AQ92625 1134 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 ZDHHC15Q96MV8 337 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 FHDC1Q9C0D6 1143 aaPredicted RBP6.07□□□□□ -1.44
RIF1-207ENST00000454583 LOXHD1Q8IVV2 1947 aa6.07□□□□□ -1.44
RIF1-207ENST00000454583 MROH7-TTC4A0A0A0MT08 1334 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 GUCY1A2P33402 732 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 STRIP1Q5VSL9 837 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 POTEEQ6S8J3 1075 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 ARXQ96QS3 562 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 SIL1Q9H173 461 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 DENND2AQ9ULE3 1009 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 EGFRP00533 1210 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 HSP90B1P14625 803 aaKnown RBP6.06□□□□□ -1.44
RIF1-207ENST00000454583 JAG1P78504 1218 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 MECOMQ03112 1051 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 HHIPL2Q6UWX4 724 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 MB21D2Q8IYB1 491 aaPredicted RBP6.06□□□□□ -1.44
RIF1-207ENST00000454583 DDX4Q9NQI0 724 aaKnown RBP6.06□□□□□ -1.44
RIF1-207ENST00000454583 FAM198AQ9UFP1 575 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 MYO3BQ8WXR4 1341 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 PHF20L1A8MW92 1017 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 PITPNM1O00562 1244 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 PDE6AP16499 860 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 HIRAP54198 1017 aaPredicted RBP6.06□□□□□ -1.44
RIF1-207ENST00000454583 RTL5Q5HYW3 569 aaPredicted RBP6.06□□□□□ -1.44
RIF1-207ENST00000454583 TATDN1Q6P1N9 297 aa6.06□□□□□ -1.44
RIF1-207ENST00000454583 GIMAP6Q6P9H5 292 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms