RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 NCOA7Q8NI08 942 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 NOL7Q9UMY1 257 aaKnown RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 IQSEC3Q9UPP2 1182 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 MYH14Q7Z406 1995 aaKnown RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 WTIPA6NIX2 430 aaPredicted RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 GOLGA8BA8MQT2 603 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 BCAMP50895 628 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 HMGN5P82970 282 aaKnown RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 FAM98CQ17RN3 349 aaKnown RBP14.15□□□□□ -0.14
COL27A1-202ENST00000451716 SPATA5Q8NB90 893 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 SPATA31A5Q5VU36 1347 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 SPATA31A7Q8IWB4 1347 aa14.15□□□□□ -0.14
COL27A1-202ENST00000451716 PLCH1Q4KWH8 1693 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 KDM4AO75164 1064 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 RXRAP19793 462 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ARID4AP29374 1257 aaPredicted RBP14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ADD1P35611 737 aaKnown RBP14.14□□□□□ -0.15
COL27A1-202ENST00000451716 TTF1Q15361 905 aaPredicted RBP14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ZSCAN16Q9H4T2 348 aaPredicted RBP14.14□□□□□ -0.15
COL27A1-202ENST00000451716 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ADCY5O95622 1261 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 FAM193AP78312 1265 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 MAP3K11Q16584 847 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ZSCAN25Q6NSZ9 544 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 PTF1AQ7RTS3 328 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 MAGEB6Q8N7X4 407 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ZNF512BQ96KM6 892 aaPredicted RBP14.14□□□□□ -0.15
COL27A1-202ENST00000451716 TNMDQ9H2S6 317 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 HPS5Q9UPZ3 1129 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 THRAP3Q9Y2W1 955 aaKnown RBP14.14□□□□□ -0.15
COL27A1-202ENST00000451716 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
COL27A1-202ENST00000451716 COL22A1Q8NFW1 1626 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-202ENST00000451716 CARMIL3Q8ND23 1372 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 SLC5A1P13866 664 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 BICDL1Q6ZP65 573 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 STK11IPQ8N1F8 1099 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 AIDAQ96BJ3 306 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 USP28Q96RU2 1077 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 SENP2Q9HC62 589 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 AP5Z1O43299 807 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 NTSR2O95665 410 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 UQCRFS1P1P0C7P4 283 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 HS1BP3Q53T59 392 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 NAA16Q6N069 864 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-202ENST00000451716 CYB5R4Q7L1T6 521 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 ILDR1Q86SU0 546 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-202ENST00000451716 MYH7P12883 1935 aa14.13□□□□□ -0.15
COL27A1-202ENST00000451716 B4E1Z4 1266 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 CCDC192P0DO97 292 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 UBE3CQ15386 1083 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 CCDC152Q4G0S7 254 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 C3orf67Q6ZVT6 689 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 STRBPQ96SI9 672 aaKnown RBP14.12□□□□□ -0.15
COL27A1-202ENST00000451716 ARMT1Q9H993 441 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 CCDC39Q9UFE4 941 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 CFAP45Q9UL16 551 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 ZKSCAN5Q9Y2L8 839 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 MBD4O95243 580 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 POLR3DP05423 398 aaPredicted RBP14.12□□□□□ -0.15
COL27A1-202ENST00000451716 EVCP57679 992 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 TYRO3Q06418 890 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 TRDNQ13061 729 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 UVSSAQ2YD98 709 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 CCDC144CPQ8IYA2 1237 aa14.12□□□□□ -0.15
COL27A1-202ENST00000451716 WNK3Q9BYP7 1800 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 PRKAB2O43741 272 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 IGHMBP2P38935 993 aaKnown RBP14.11□□□□□ -0.15
COL27A1-202ENST00000451716 KIF3AQ9Y496 699 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 MRVI1Q9Y6F6 885 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 CPLX1O14810 134 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 CLGNO14967 610 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 CHRNDQ07001 517 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 PARP10Q53GL7 1025 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 LUZP1Q86V48 1076 aa14.11□□□□□ -0.15
COL27A1-202ENST00000451716 EPB41L4AQ9HCS5 686 aaPredicted RBP14.11□□□□□ -0.15
COL27A1-202ENST00000451716 ORC3Q9UBD5 711 aaPredicted RBP14.11□□□□□ -0.15
COL27A1-202ENST00000451716 NEDD4P46934 1319 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 FAM182BQ5T319 152 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 FBXL16Q8N461 479 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 MIGA1Q8NAN2 632 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 LINC00116Q8NCU8 138 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 AIFM3Q96NN9 605 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 COL4A1P02462 1669 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 PHLPP1O60346 1717 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 AK7Q96M32 723 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 C8orf37Q96NL8 207 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 MYL10Q9BUA6 226 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 CLSTN2Q9H4D0 955 aa14.1□□□□□ -0.15
COL27A1-202ENST00000451716 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL27A1-202ENST00000451716 MAP3K12Q12852 859 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 ANO6Q4KMQ2 910 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 CCDC24Q8N4L8 307 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 C8orf76Q96K31 380 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 GOLPH3LQ9H4A5 285 aa14.09□□□□□ -0.15
COL27A1-202ENST00000451716 DDX19AQ9NUU7 478 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms