RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 CCDC189A1A4V9 331 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 STK10O94804 968 aaKnown RBP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 POLR3DP05423 398 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 CELA2BP08218 269 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 ATP4AP20648 1035 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 GUCY2CP25092 1073 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 DDIT3P35638 169 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 PHKA2P46019 1235 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 GSCP56915 257 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 GRM2Q14416 872 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 SYCP1Q15431 976 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZNF662Q6ZS27 426 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 TRIM22Q8IYM9 498 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 GPRASP2Q96D09 838 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 BORCS6Q96GS4 357 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZIC5Q96T25 663 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 GAS2L1Q99501 681 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 RSRP1Q9BUV0 290 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 BCO2Q9BYV7 579 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 OSBPL2Q9H1P3 480 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 SUV39H2Q9H5I1 410 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZSWIM4Q9H7M6 989 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 MED4Q9NPJ6 270 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 CALCOCO1Q9P1Z2 691 aa4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 FEZ2Q9UHY8 353 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P8-201ENST00000449709 ROCK2O75116 1388 aaKnown RBP4.4□□□□□ -1.7
HMGB3P8-201ENST00000449709 KANK1Q14678 1352 aa4.4□□□□□ -1.7
HMGB3P8-201ENST00000449709 RAB3GAP2Q9H2M9 1393 aa4.4□□□□□ -1.7
HMGB3P8-201ENST00000449709 KLHL33A6NCF5 533 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 EREGO14944 169 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 EGFRP00533 1210 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 KCNJ4P48050 445 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 ANAPC15P60006 121 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 MAP3K10Q02779 954 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 LMOD3Q0VAK6 560 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 NBPF6Q5VWK0 638 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 SDE2Q6IQ49 451 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZNF746Q6NUN9 644 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 BICDL1Q6ZP65 573 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 NBPF5PQ86XG9 351 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 C1orf127Q8N9H9 656 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 PNISRQ8TF01 805 aaKnown RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 GTPBP3Q969Y2 492 aaKnown RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 NBPF4Q96M43 638 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 POLR3GLQ9BT43 218 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 NOC4LQ9BVI4 516 aaKnown RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 PRKRIP1Q9H875 184 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 SMC4Q9NTJ3 1288 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 KBTBD4Q9NVX7 518 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 RBM28Q9NW13 759 aaKnown RBP4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 CNTN3Q9P232 1028 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 ZKSCAN5Q9Y2L8 839 aa4.4□□□□□ -1.71
HMGB3P8-201ENST00000449709 MIA2Q96PC5 1412 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 E9PCH4 1651 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 GADD45BO75293 160 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 GSTT1P30711 240 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 TYRO3Q06418 890 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 BECN1Q14457 450 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 SETDB1Q15047 1291 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 MUM1L1Q5H9M0 696 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 WDR44Q5JSH3 913 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 KIAA0319Q5VV43 1072 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 EGFLAMQ63HQ2 1017 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 ICE2Q659A1 982 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 GPAT2Q6NUI2 795 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 LRRC69Q6ZNQ3 347 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 CLEC17AQ6ZS10 378 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 ANKRD23Q86SG2 305 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 RPAINQ86UA6 219 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 ANKRD13AQ8IZ07 590 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 GPATCH11Q8N954 259 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 C3orf58Q8NDZ4 430 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 GLIS3Q8NEA6 775 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 ITFG2Q969R8 447 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 PMEPA1Q969W9 287 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 SEC16BQ96JE7 1060 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 NEUROD4Q9HD90 331 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 C11orf16Q9NQ32 467 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 MBIPQ9NS73 344 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 TERF2IPQ9NYB0 399 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 OGFRQ9NZT2 677 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 R3HCC1Q9Y3T6 440 aaKnown RBP4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 DYRK1BQ9Y463 629 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 CCNB3Q8WWL7 1395 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 SBNO2Q9Y2G9 1366 aa4.39□□□□□ -1.71
HMGB3P8-201ENST00000449709 SETD5Q9C0A6 1442 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 PLEKHH2Q8IVE3 1493 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 LOC102724159A0A0B4J2E5 919 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 CTIFO43310 598 aaKnown RBP4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 DHX16O60231 1041 aaKnown RBP4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 XYLBO75191 536 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 EPB42P16452 691 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 MSX1P28360 303 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 MTA1Q13330 715 aa4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 PWP2Q15269 919 aaKnown RBP4.38□□□□□ -1.71
HMGB3P8-201ENST00000449709 TERF2Q15554 542 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms