RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 APPP05067 770 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 DDR1Q08345 913 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 CAVIN4Q5BKX8 364 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 AIDAQ96BJ3 306 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 STRBPQ96SI9 672 aaKnown RBP19■□□□□ 0.63
AP000253.1-201ENST00000449339 LRP2BPQ9P2M1 347 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 ABCF2Q9UG63 623 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 JAK2O60674 1132 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 MBD4O95243 580 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 SCRN1Q12765 414 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 SYAP1Q96A49 352 aaPredicted RBP19■□□□□ 0.63
AP000253.1-201ENST00000449339 ARMT1Q9H993 441 aa19■□□□□ 0.63
AP000253.1-201ENST00000449339 GNL3LQ9NVN8 582 aaKnown RBP19■□□□□ 0.63
AP000253.1-201ENST00000449339 PFKFB2O60825 505 aa18.99■□□□□ 0.63
AP000253.1-201ENST00000449339 NASPP49321 788 aaPredicted RBP18.99■□□□□ 0.63
AP000253.1-201ENST00000449339 RXRBP28702 533 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 UBE2HP62256 183 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 APOBRQ0VD83 1088 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 GRAPQ13588 217 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 LRSAM1Q6UWE0 723 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 TXNRD3Q86VQ6 643 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 GRAPLQ8TC17 118 aaPredicted RBP18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 ANKRD2Q9GZV1 360 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 NBPF3Q9H094 633 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 CSPP1Q1MSJ5 1256 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 FBXO33Q7Z6M2 555 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 FERMT3Q86UX7 667 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 MIGA1Q8NAN2 632 aa18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 RTN4Q9NQC3 1192 aaKnown RBP18.98■□□□□ 0.63
AP000253.1-201ENST00000449339 ZNF213O14771 459 aa18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 ADGRA1Q86SQ6 560 aa18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 GPHNQ9NQX3 736 aaPredicted RBP18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 DENND2AQ9ULE3 1009 aa18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 PRKAB2O43741 272 aa18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 LLPHQ9BRT6 129 aaKnown RBP18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 RAI14Q9P0K7 980 aa18.97■□□□□ 0.63
AP000253.1-201ENST00000449339 MYH13Q9UKX3 1938 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 POLRMTO00411 1230 aaKnown RBP18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 ST5P78524 1137 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 FBXL16Q8N461 479 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 NKX2-3Q8TAU0 364 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 EPB41L4AQ9HCS5 686 aaPredicted RBP18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 PLSCR1O15162 318 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 CYP7A1P22680 504 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 TBC1D10CQ8IV04 446 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 SMARCC2Q8TAQ2 1214 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 RPGRQ92834 1020 aaKnown RBP18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 ANKIB1Q9P2G1 1089 aa18.96■□□□□ 0.63
AP000253.1-201ENST00000449339 HIBADHP31937 336 aaKnown RBP18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 COL23A1Q86Y22 540 aaPredicted RBP18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 AKT1S1Q96B36 256 aa18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 DDX11Q96FC9 970 aa18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 ZNF274Q96GC6 653 aaPredicted RBP18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 GPR101Q96P66 508 aaPredicted RBP18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 RBSNQ9H1K0 784 aa18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 JAG2Q9Y219 1238 aa18.95■□□□□ 0.62
AP000253.1-201ENST00000449339 KRT85P78386 507 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 MB21D2Q8IYB1 491 aaPredicted RBP18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 PATL2C9JE40 543 aaKnown RBP18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 PDIA3P30101 505 aaKnown RBP18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 IFNL3Q8IZI9 196 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 FAM184AQ8NB25 1140 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 NSUN7Q8NE18 718 aaKnown RBP18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 NCOA7Q8NI08 942 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 INCENPQ9NQS7 918 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 RGS17Q9UGC6 210 aaPredicted RBP18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 CACNA1SQ13698 1873 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 IRS2Q9Y4H2 1338 aa18.94■□□□□ 0.62
AP000253.1-201ENST00000449339 GSG1L2A8MUP6 293 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 MCM5P33992 734 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 ANTXR2P58335 489 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 CCT2P78371 535 aaKnown RBP18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 CHAF1AQ13111 956 aaPredicted RBP18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 CRY2Q49AN0 593 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 FAM173BQ6P4H8 233 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 NAP1L2Q9ULW6 460 aaPredicted RBP18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 PRC1O43663 620 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 CTDNEP1O95476 244 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 EVCP57679 992 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 RALYLQ86SE5 291 aaKnown RBP18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 ANP32BQ92688 251 aaKnown RBP18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 SLC4A4Q9Y6R1 1079 aa18.93■□□□□ 0.62
AP000253.1-201ENST00000449339 PTPDC1A2A3K4 754 aa18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 H3BQV1 296 aa18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 HMGN5P82970 282 aaKnown RBP18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 IFFO2Q5TF58 517 aa18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 NCOA5Q9HCD5 579 aaKnown RBP18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 GPSM2P81274 684 aa18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 NAPBQ9H115 298 aa18.92■□□□□ 0.62
AP000253.1-201ENST00000449339 CTDSPL2Q05D32 466 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 ALX1Q15699 326 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 CCDC183Q5T5S1 534 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 POTEAQ6S8J7 498 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 FAM43AQ8N2R8 423 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 CHMP4CQ96CF2 233 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 TACC3Q9Y6A5 838 aa18.91■□□□□ 0.62
AP000253.1-201ENST00000449339 PNPLA7Q6ZV29 1317 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms