RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SUGCTQ9HAC7 445 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
LINC00342-202ENST00000448494 RBM47A0AV96 593 aaKnown RBP12.22□□□□□ -0.45
LINC00342-202ENST00000448494 ZEB2O60315 1214 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 PPFIA3O75145 1194 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 WDHD1O75717 1129 aaPredicted RBP12.22□□□□□ -0.45
LINC00342-202ENST00000448494 PAPOLAP51003 745 aaKnown RBP12.22□□□□□ -0.45
LINC00342-202ENST00000448494 DBN1Q16643 649 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
LINC00342-202ENST00000448494 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 DHX58Q96C10 678 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 UPF3BQ9BZI7 483 aaKnown RBP12.22□□□□□ -0.45
LINC00342-202ENST00000448494 SUN2Q9UH99 717 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 MYL1P05976 194 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 ATP5JP18859 108 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 NUTM2GQ5VZR2 741 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 WDR93Q6P2C0 686 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 CYB5D1Q6P9G0 228 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 FAM228AQ86W67 206 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 CCDC13Q8IYE1 715 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 MIPOL1Q8TD10 442 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 WDR24Q96S15 920 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 CENPHQ9H3R5 247 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
LINC00342-202ENST00000448494 KDM5AP29375 1690 aaKnown RBP12.21□□□□□ -0.45
LINC00342-202ENST00000448494 NR1I2O75469 434 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 BZW1Q7L1Q6 419 aaKnown RBP12.21□□□□□ -0.45
LINC00342-202ENST00000448494 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.45
LINC00342-202ENST00000448494 DTNBP1Q96EV8 351 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 SPAG5Q96R06 1193 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 PPP2R2CQ9Y2T4 447 aa12.21□□□□□ -0.45
LINC00342-202ENST00000448494 VSNL1P62760 191 aa12.21□□□□□ -0.46
LINC00342-202ENST00000448494 RRP12Q5JTH9 1297 aaKnown RBP12.21□□□□□ -0.46
LINC00342-202ENST00000448494 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.46
LINC00342-202ENST00000448494 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.46
LINC00342-202ENST00000448494 ATL2Q8NHH9 583 aa12.21□□□□□ -0.46
LINC00342-202ENST00000448494 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.46
LINC00342-202ENST00000448494 ARHGAP6O43182 974 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 PDHBP11177 359 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 MCM3P25205 808 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 GJB2P29033 226 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 AMPHP49418 695 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 TAX1BP1Q86VP1 789 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 BICD1Q96G01 975 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 RBM17Q96I25 401 aaKnown RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 SPATA32Q96LK8 384 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 CCDC114Q96M63 670 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 TTC14Q96N46 770 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 RTEL1Q9NZ71 1219 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 HPCAL4Q9UM19 191 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 G3BP2Q9UN86 482 aaKnown RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 ABCC4O15439 1325 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 ZNF518AQ6AHZ1 1483 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 ARHGEF5Q12774 1597 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 CEP152O94986 1710 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 GOLGA6CA6NDK9 693 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 GOLGA6L10A6NI86 522 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 RPSAP08865 295 aaKnown RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 GOLGA6DP0CG33 693 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 LRRC23Q53EV4 343 aaPredicted RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 OTUD7AQ8TE49 926 aaPredicted RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 XPO4Q9C0E2 1151 aaKnown RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 PAPOLBQ9NRJ5 636 aaKnown RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 GOLGA6AQ9NYA3 693 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 CDC23Q9UJX2 597 aa12.2□□□□□ -0.46
LINC00342-202ENST00000448494 TPX2Q9ULW0 747 aaKnown RBP12.2□□□□□ -0.46
LINC00342-202ENST00000448494 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 GOLGA6BA6NDN3 693 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 NDUFAB1O14561 156 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 TPD52L2O43399 206 aaKnown RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 PPP1R12BO60237 982 aaPredicted RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 IBSPP21815 317 aaPredicted RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 GNGT1P63211 74 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 ACBD5Q5T8D3 534 aaPredicted RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 EBF2Q9HAK2 575 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 RAPGEF6Q8TEU7 1601 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 HSPA4P34932 840 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 APLFQ8IW19 511 aaPredicted RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 FUKQ8N0W3 1084 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 RBM41Q96IZ5 413 aaKnown RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 SH3GL2Q99962 352 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 BPIFA3Q9BQP9 254 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 MMADHCQ9H3L0 296 aaPredicted RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 ANO2Q9NQ90 1003 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 ZNF777Q9ULD5 760 aaPredicted RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
LINC00342-202ENST00000448494 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
LINC00342-202ENST00000448494 ABCA8O94911 1581 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms