RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 VPS33BQ9H267 617 aa11.02□□□□□ -0.65
CCNDBP1-202ENST00000444658 CD209Q9NNX6 404 aa11.02□□□□□ -0.65
CCNDBP1-202ENST00000444658 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.65
CCNDBP1-202ENST00000444658 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 FAM205AQ6ZU69 1335 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 UFL1O94874 794 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 CHGBP05060 677 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 MSL1Q68DK7 614 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 CCDC129Q6ZRS4 1044 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 NSUN4Q96CB9 384 aaKnown RBP11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 FAM163AQ96GL9 167 aaPredicted RBP11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 EYA3Q99504 573 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 ZC3H12CQ9C0D7 883 aaKnown RBP11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 AKAP11Q9UKA4 1901 aa11.01□□□□□ -0.65
CCNDBP1-202ENST00000444658 FOXP2O15409 715 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 LDHCP07864 332 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 PDIA4P13667 645 aaKnown RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 KLRK1P26718 216 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 NT5C2P49902 561 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 GSTO1P78417 241 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 ADCK5Q3MIX3 580 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 DPP8Q6V1X1 898 aaPredicted RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 PODNQ7Z5L7 613 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 JAKMIP1Q96N16 626 aaKnown RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 MRIQ9BWK5 157 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 NACAP1Q9BZK3 213 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 MTFR1LQ9H019 292 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 CHMP5Q9NZZ3 219 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 C6orf229H3BNL8 230 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 ZNF213O14771 459 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 CASTP20810 708 aaKnown RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 CYP7A1P22680 504 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 RPS6KB1P23443 525 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 PPP4CP60510 307 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 FKBP1AP62942 108 aaKnown RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 SLFNL1Q499Z3 407 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 BLOC1S2Q6QNY1 142 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 SUPT20HQ8NEM7 779 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 UPF1Q92900 1129 aaKnown RBP eCLIP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 CHMP4CQ96CF2 233 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 TMX3Q96JJ7 454 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 AGXT2Q9BYV1 514 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 SH2B1Q9NRF2 756 aaPredicted RBP11□□□□□ -0.65
CCNDBP1-202ENST00000444658 PDRG1Q9NUG6 133 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 RAI14Q9P0K7 980 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 ABCF2Q9UG63 623 aa11□□□□□ -0.65
CCNDBP1-202ENST00000444658 AK9Q5TCS8 1911 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 GSG1L2A8MUP6 293 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 EXOSC10Q01780 885 aaKnown RBP10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 DHX32Q7L7V1 743 aaKnown RBP10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 IFNL3Q8IZI9 196 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 UPF3BQ9BZI7 483 aaKnown RBP10.99□□□□□ -0.65
CCNDBP1-202ENST00000444658 C10orf71Q711Q0 1435 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 MAGEB6P1A0A0J9YX57 407 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 E7EWF7 191 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 LDHBP07195 334 aaKnown RBP10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 PCP11498 1178 aaKnown RBP10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 POLD1P28340 1107 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 MECOMQ03112 1051 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 SOGA3Q5TF21 947 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 RTKN2Q8IZC4 609 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 TTLL6Q8N841 843 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 ANAPC4Q9UJX5 808 aa10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 IQSEC3Q9UPP2 1182 aaPredicted RBP10.98□□□□□ -0.65
CCNDBP1-202ENST00000444658 MBD4O95243 580 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 HSP90AA1P07900 732 aaKnown RBP10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 KCNA3P22001 575 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 AK2P54819 239 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 EVCP57679 992 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 NBR1Q14596 966 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 POTEHQ6S545 545 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 ZNF384Q8TF68 577 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 PDGFDQ9GZP0 370 aaPredicted RBP10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 ATP8A2Q9NTI2 1148 aa10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 COL1A1P02452 1464 aaPredicted RBP10.97□□□□□ -0.65
CCNDBP1-202ENST00000444658 BAG3O95817 575 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 FGRP09769 529 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 NCOA7Q8NI08 942 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 PSMD1Q99460 953 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 CNNM2Q9H8M5 875 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 CD2APQ9Y5K6 639 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
CCNDBP1-202ENST00000444658 APPP05067 770 aa10.95□□□□□ -0.66
CCNDBP1-202ENST00000444658 PLCG2P16885 1265 aa10.95□□□□□ -0.66
CCNDBP1-202ENST00000444658 PRDX5P30044 214 aa10.95□□□□□ -0.66
CCNDBP1-202ENST00000444658 CHRNA5P30532 468 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms