RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 HHIPL1Q96JK4 782 aa29.19■■■□□ 2.26
VARS-217ENST00000440048 DENND2AQ9ULE3 1009 aa29.19■■■□□ 2.26
VARS-217ENST00000440048 CLRN2A0PK11 232 aa29.18■■■□□ 2.26
VARS-217ENST00000440048 HDLBPQ00341 1268 aaKnown RBP29.18■■■□□ 2.26
VARS-217ENST00000440048 CYP4F22Q6NT55 531 aa29.18■■■□□ 2.26
VARS-217ENST00000440048 CAPNS2Q96L46 248 aa29.18■■■□□ 2.26
VARS-217ENST00000440048 CHMP4BQ9H444 224 aaKnown RBP29.18■■■□□ 2.26
VARS-217ENST00000440048 HUNKP57058 714 aa29.17■■■□□ 2.26
VARS-217ENST00000440048 AIDAQ96BJ3 306 aa29.16■■■□□ 2.26
VARS-217ENST00000440048 GPR108Q9NPR9 543 aa29.16■■■□□ 2.26
VARS-217ENST00000440048 MAST3O60307 1309 aa29.16■■■□□ 2.26
VARS-217ENST00000440048 MAP2K1Q02750 393 aaPredicted RBP29.15■■■□□ 2.26
VARS-217ENST00000440048 RASGRF1Q13972 1273 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 TNNI3KQ59H18 835 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 GORABQ5T7V8 394 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 RPAP2Q8IXW5 612 aaPredicted RBP29.15■■■□□ 2.26
VARS-217ENST00000440048 TEKT1Q969V4 418 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 MRIQ9BWK5 157 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 DEFB129Q9H1M3 183 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 TDRD3Q9H7E2 651 aaKnown RBP29.15■■■□□ 2.26
VARS-217ENST00000440048 VEZTQ9HBM0 779 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 FPGT-TNNI3KV9GXZ4 949 aa29.15■■■□□ 2.26
VARS-217ENST00000440048 GRM1Q13255 1194 aa29.14■■■□□ 2.26
VARS-217ENST00000440048 SPDYE2Q495Y8 402 aa29.14■■■□□ 2.26
VARS-217ENST00000440048 ZNF70Q9UC06 446 aaPredicted RBP29.14■■■□□ 2.26
VARS-217ENST00000440048 SALL1Q9NSC2 1324 aa29.14■■■□□ 2.25
VARS-217ENST00000440048 PAPPA2Q9BXP8 1791 aa29.13■■■□□ 2.25
VARS-217ENST00000440048 WBP1LQ9NX94 342 aa29.13■■■□□ 2.25
VARS-217ENST00000440048 PDS5AQ29RF7 1337 aaKnown RBP29.13■■■□□ 2.25
VARS-217ENST00000440048 PRDX5P30044 214 aa29.12■■■□□ 2.25
VARS-217ENST00000440048 SIRT2Q8IXJ6 389 aa29.12■■■□□ 2.25
VARS-217ENST00000440048 ZDHHC15Q96MV8 337 aa29.12■■■□□ 2.25
VARS-217ENST00000440048 EXOC6BQ9Y2D4 811 aa29.12■■■□□ 2.25
VARS-217ENST00000440048 LDHBP07195 334 aaKnown RBP29.11■■■□□ 2.25
VARS-217ENST00000440048 FKBP1BP68106 108 aa29.11■■■□□ 2.25
VARS-217ENST00000440048 COL13A1Q5TAT6 717 aaPredicted RBP29.11■■■□□ 2.25
VARS-217ENST00000440048 HHIPL2Q6UWX4 724 aa29.11■■■□□ 2.25
VARS-217ENST00000440048 PPP2R3BQ9Y5P8 575 aa29.11■■■□□ 2.25
VARS-217ENST00000440048 THSD7BQ9C0I4 1608 aa29.1■■■□□ 2.25
VARS-217ENST00000440048 NF2P35240 595 aa29.1■■■□□ 2.25
VARS-217ENST00000440048 MAP2K2P36507 400 aa29.1■■■□□ 2.25
VARS-217ENST00000440048 DBNDD2Q9BQY9 259 aa29.1■■■□□ 2.25
VARS-217ENST00000440048 HMMRO75330 724 aa29.09■■■□□ 2.25
VARS-217ENST00000440048 ARID4AP29374 1257 aaPredicted RBP29.09■■■□□ 2.25
VARS-217ENST00000440048 CTCFP49711 727 aaPredicted RBP29.09■■■□□ 2.25
VARS-217ENST00000440048 RGMBQ6NW40 437 aa29.09■■■□□ 2.25
VARS-217ENST00000440048 MOB2Q70IA6 237 aa29.09■■■□□ 2.25
VARS-217ENST00000440048 ZGPATQ8N5A5 531 aaKnown RBP29.09■■■□□ 2.25
VARS-217ENST00000440048 HMG20BQ9P0W2 317 aa29.09■■■□□ 2.25
VARS-217ENST00000440048 AOC2O75106 756 aa29.08■■■□□ 2.25
VARS-217ENST00000440048 RASA3Q14644 834 aa29.08■■■□□ 2.25
VARS-217ENST00000440048 APOBEC3HQ6NTF7 200 aaKnown RBP29.08■■■□□ 2.25
VARS-217ENST00000440048 ERC1Q8IUD2 1116 aa29.08■■■□□ 2.25
VARS-217ENST00000440048 FOXN1O15353 648 aa29.07■■■□□ 2.24
VARS-217ENST00000440048 UQCRFS1P1P0C7P4 283 aa29.07■■■□□ 2.24
VARS-217ENST00000440048 RRP1P56182 461 aaKnown RBP29.07■■■□□ 2.24
VARS-217ENST00000440048 TNFAIP1Q13829 316 aa29.07■■■□□ 2.24
VARS-217ENST00000440048 DIXDC1Q155Q3 683 aa29.07■■■□□ 2.24
VARS-217ENST00000440048 HSP90AB4PQ58FF6 505 aa29.07■■■□□ 2.24
VARS-217ENST00000440048 UBE2Q2LH0YL09 131 aa29.06■■■□□ 2.24
VARS-217ENST00000440048 TTLL12Q14166 644 aaPredicted RBP29.06■■■□□ 2.24
VARS-217ENST00000440048 PI16Q6UXB8 463 aa29.06■■■□□ 2.24
VARS-217ENST00000440048 SPATA5Q8NB90 893 aa29.06■■■□□ 2.24
VARS-217ENST00000440048 EAF2Q96CJ1 260 aaPredicted RBP29.06■■■□□ 2.24
VARS-217ENST00000440048 BEGAINQ9BUH8 593 aa29.06■■■□□ 2.24
VARS-217ENST00000440048 ABCF2Q9UG63 623 aa29.06■■■□□ 2.24
VARS-217ENST00000440048 MYH2Q9UKX2 1941 aa29.06■■■□□ 2.24
VARS-217ENST00000440048 TCP10L2B9ZVM9 353 aa29.05■■■□□ 2.24
VARS-217ENST00000440048 MCAMP43121 646 aa29.05■■■□□ 2.24
VARS-217ENST00000440048 ZNF157P51786 506 aaPredicted RBP29.05■■■□□ 2.24
VARS-217ENST00000440048 CCDC8Q9H0W5 538 aaPredicted RBP29.05■■■□□ 2.24
VARS-217ENST00000440048 DBNLQ9UJU6 430 aaKnown RBP29.05■■■□□ 2.24
VARS-217ENST00000440048 DAGLAQ9Y4D2 1042 aa29.05■■■□□ 2.24
VARS-217ENST00000440048 PRKG1Q13976 671 aa29.04■■■□□ 2.24
VARS-217ENST00000440048 CCDC158Q5M9N0 1113 aa29.04■■■□□ 2.24
VARS-217ENST00000440048 TTC39AQ5SRH9 613 aa29.04■■■□□ 2.24
VARS-217ENST00000440048 NBPF12Q5TAG4 269 aaPredicted RBP29.04■■■□□ 2.24
VARS-217ENST00000440048 SPTY2D1Q68D10 685 aaPredicted RBP29.04■■■□□ 2.24
VARS-217ENST00000440048 PRDM10Q9NQV6 1147 aa29.04■■■□□ 2.24
VARS-217ENST00000440048 TLR7Q9NYK1 1049 aaKnown RBP29.04■■■□□ 2.24
VARS-217ENST00000440048 SSC5DA1L4H1 1573 aa29.04■■■□□ 2.24
VARS-217ENST00000440048 AKAP11Q9UKA4 1901 aa29.04■■■□□ 2.24
VARS-217ENST00000440048 FAM155AB1AL88 458 aaPredicted RBP29.03■■■□□ 2.24
VARS-217ENST00000440048 CACNB3P54284 484 aa29.03■■■□□ 2.24
VARS-217ENST00000440048 RHPN1Q8TCX5 695 aa29.03■■■□□ 2.24
VARS-217ENST00000440048 CCDC102AQ96A19 550 aa29.03■■■□□ 2.24
VARS-217ENST00000440048 TNNI2P48788 182 aa29.02■■■□□ 2.24
VARS-217ENST00000440048 SUPT20HL1Q3ZLR7 823 aa29.02■■■□□ 2.24
VARS-217ENST00000440048 ARMC9Q7Z3E5 817 aa29.02■■■□□ 2.24
VARS-217ENST00000440048 DZIP1Q86YF9 867 aaKnown RBP29.02■■■□□ 2.24
VARS-217ENST00000440048 TMOD2Q9NZR1 351 aa29.02■■■□□ 2.24
VARS-217ENST00000440048 NOGQ13253 232 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 TBC1D9Q6ZT07 1266 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 ERICH6Q7L0X2 663 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 TNS4Q8IZW8 715 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 ZIC5Q96T25 663 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 IL1RAPL2Q9NP60 686 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 FZD1Q9UP38 647 aa29.01■■■□□ 2.23
VARS-217ENST00000440048 APBB1O00213 710 aa29■■■□□ 2.23
VARS-217ENST00000440048 SLC10A3P09131 477 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms