RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HMG20BQ9P0W2 317 aa14.49□□□□□ -0.09
HSPG2-206ENST00000439717 ASTN2O75129 1339 aaPredicted RBP14.48□□□□□ -0.09
HSPG2-206ENST00000439717 LDHBP07195 334 aaKnown RBP14.48□□□□□ -0.09
HSPG2-206ENST00000439717 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
HSPG2-206ENST00000439717 CRKP46108 304 aa14.48□□□□□ -0.09
HSPG2-206ENST00000439717 RBM5P52756 815 aaKnown RBP eCLIP14.48□□□□□ -0.09
HSPG2-206ENST00000439717 USP48Q86UV5 1035 aa14.48□□□□□ -0.09
HSPG2-206ENST00000439717 PRMT6Q96LA8 375 aaPredicted RBP14.48□□□□□ -0.09
HSPG2-206ENST00000439717 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
HSPG2-206ENST00000439717 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
HSPG2-206ENST00000439717 TMEM88BA6NKF7 163 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 TRAF5O00463 557 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 IGSF3O75054 1194 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 MCAMP43121 646 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 HDAC1Q13547 482 aaPredicted RBP14.47□□□□□ -0.09
HSPG2-206ENST00000439717 HHIPL2Q6UWX4 724 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 APOBEC3FQ8IUX4 373 aaKnown RBP14.47□□□□□ -0.09
HSPG2-206ENST00000439717 EXOC6Q8TAG9 804 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 ZDHHC15Q96MV8 337 aa14.47□□□□□ -0.09
HSPG2-206ENST00000439717 ADM5C9JUS6 153 aa14.46□□□□□ -0.09
HSPG2-206ENST00000439717 PRDX5P30044 214 aa14.46□□□□□ -0.09
HSPG2-206ENST00000439717 ABCF2Q9UG63 623 aa14.46□□□□□ -0.09
HSPG2-206ENST00000439717 PCDHAC2Q9Y5I4 1007 aa14.46□□□□□ -0.09
HSPG2-206ENST00000439717 PI16Q6UXB8 463 aa14.45□□□□□ -0.1
HSPG2-206ENST00000439717 ERICH6Q7L0X2 663 aa14.45□□□□□ -0.1
HSPG2-206ENST00000439717 SLF2Q8IX21 1173 aa14.45□□□□□ -0.1
HSPG2-206ENST00000439717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.45□□□□□ -0.1
HSPG2-206ENST00000439717 PPP2R3BQ9Y5P8 575 aa14.45□□□□□ -0.1
HSPG2-206ENST00000439717 CELF2O95319 508 aaKnown RBP14.44□□□□□ -0.1
HSPG2-206ENST00000439717 FMR1Q06787 632 aaKnown RBP eCLIP14.44□□□□□ -0.1
HSPG2-206ENST00000439717 SPDYE2Q495Y8 402 aa14.44□□□□□ -0.1
HSPG2-206ENST00000439717 CST9Q5W186 159 aa14.44□□□□□ -0.1
HSPG2-206ENST00000439717 APOBEC3HQ6NTF7 200 aaKnown RBP14.44□□□□□ -0.1
HSPG2-206ENST00000439717 DZIP1Q86YF9 867 aaKnown RBP14.44□□□□□ -0.1
HSPG2-206ENST00000439717 GCC1Q96CN9 775 aa14.44□□□□□ -0.1
HSPG2-206ENST00000439717 FAM163AQ96GL9 167 aaPredicted RBP14.44□□□□□ -0.1
HSPG2-206ENST00000439717 RWDD1Q9H446 243 aaPredicted RBP14.44□□□□□ -0.1
HSPG2-206ENST00000439717 ECM29Q5VYK3 1845 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 CLRN2A0PK11 232 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 CYP2E1P05181 493 aaPredicted RBP14.43□□□□□ -0.1
HSPG2-206ENST00000439717 ZAP70P43403 619 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 GSTO1P78417 241 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 TNFAIP1Q13829 316 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 CDCA5Q96FF9 252 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 TDRD3Q9H7E2 651 aaKnown RBP14.43□□□□□ -0.1
HSPG2-206ENST00000439717 SNRKQ9NRH2 765 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 LRP2BPQ9P2M1 347 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
HSPG2-206ENST00000439717 TRPM7Q96QT4 1865 aa14.43□□□□□ -0.1
HSPG2-206ENST00000439717 GAKO14976 1311 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
HSPG2-206ENST00000439717 SMARCA5O60264 1052 aaPredicted RBP14.42□□□□□ -0.1
HSPG2-206ENST00000439717 LDHCP07864 332 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 MECOMQ03112 1051 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 DIXDC1Q155Q3 683 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 FKBP1CQ5VVH2 108 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 TMED8Q6PL24 325 aaPredicted RBP14.42□□□□□ -0.1
HSPG2-206ENST00000439717 TBC1D9Q6ZT07 1266 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 DEFB129Q9H1M3 183 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 ZNF408Q9H9D4 720 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 VEZTQ9HBM0 779 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 RAI14Q9P0K7 980 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 DAGLAQ9Y4D2 1042 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 AKAP11Q9UKA4 1901 aa14.42□□□□□ -0.1
HSPG2-206ENST00000439717 AOX1Q06278 1338 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 ATP5JP18859 108 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 TNNI2P48788 182 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 HTRA3P83110 453 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 DLK2Q6UY11 383 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 NSUN4Q96CB9 384 aaKnown RBP14.41□□□□□ -0.1
HSPG2-206ENST00000439717 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 BCL11AQ9H165 835 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 TMOD2Q9NZR1 351 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-206ENST00000439717 SCAF8Q9UPN6 1271 aaKnown RBP14.41□□□□□ -0.1
HSPG2-206ENST00000439717 TLL2Q9Y6L7 1015 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
HSPG2-206ENST00000439717 NF2P35240 595 aa14.4□□□□□ -0.1
HSPG2-206ENST00000439717 FKBP1BP68106 108 aa14.4□□□□□ -0.1
HSPG2-206ENST00000439717 IRX6P78412 446 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-206ENST00000439717 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-206ENST00000439717 FAM83AQ86UY5 434 aa14.4□□□□□ -0.1
HSPG2-206ENST00000439717 DNAJC5GQ8N7S2 189 aa14.4□□□□□ -0.1
HSPG2-206ENST00000439717 C2orf69Q8N8R5 385 aa14.4□□□□□ -0.1
HSPG2-206ENST00000439717 GBA2Q9HCG7 927 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-206ENST00000439717 ABT1Q9ULW3 272 aaKnown RBP14.4□□□□□ -0.1
HSPG2-206ENST00000439717 GPR75-ASB3A0A0A6YYF3 556 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 RASSF10A6NK89 507 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 MAP4K4O95819 1239 aaPredicted RBP14.39□□□□□ -0.11
HSPG2-206ENST00000439717 RASA3Q14644 834 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 NAA16Q6N069 864 aaPredicted RBP14.39□□□□□ -0.11
HSPG2-206ENST00000439717 SAPCD2Q86UD0 394 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 SMC5Q8IY18 1101 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 HHIPL1Q96JK4 782 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 PIH1D3Q9NQM4 214 aaKnown RBP14.39□□□□□ -0.11
HSPG2-206ENST00000439717 ECHDC1Q9NTX5 307 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
HSPG2-206ENST00000439717 CNTNAP1P78357 1384 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms