RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 SUGT1Q9Y2Z0 365 aa29.68■■■□□ 2.34
CPNE1-217ENST00000439669 MAST3O60307 1309 aa29.68■■■□□ 2.34
CPNE1-217ENST00000439669 SEMA3EO15041 775 aa29.67■■■□□ 2.34
CPNE1-217ENST00000439669 PAPPA2Q9BXP8 1791 aa29.67■■■□□ 2.34
CPNE1-217ENST00000439669 TTLL12Q14166 644 aaPredicted RBP29.66■■■□□ 2.34
CPNE1-217ENST00000439669 TEKT1Q969V4 418 aa29.66■■■□□ 2.34
CPNE1-217ENST00000439669 DEFB129Q9H1M3 183 aa29.66■■■□□ 2.34
CPNE1-217ENST00000439669 FKBP1BP68106 108 aa29.65■■■□□ 2.34
CPNE1-217ENST00000439669 HDLBPQ00341 1268 aaKnown RBP29.65■■■□□ 2.34
CPNE1-217ENST00000439669 GORABQ5T7V8 394 aa29.65■■■□□ 2.34
CPNE1-217ENST00000439669 RGMBQ6NW40 437 aa29.65■■■□□ 2.34
CPNE1-217ENST00000439669 AIDAQ96BJ3 306 aa29.65■■■□□ 2.34
CPNE1-217ENST00000439669 TDRD3Q9H7E2 651 aaKnown RBP29.65■■■□□ 2.34
CPNE1-217ENST00000439669 THSD7BQ9C0I4 1608 aa29.64■■■□□ 2.34
CPNE1-217ENST00000439669 AOC2O75106 756 aa29.64■■■□□ 2.34
CPNE1-217ENST00000439669 SPDYE2Q495Y8 402 aa29.64■■■□□ 2.34
CPNE1-217ENST00000439669 ZNF70Q9UC06 446 aaPredicted RBP29.64■■■□□ 2.34
CPNE1-217ENST00000439669 RASGRF1Q13972 1273 aa29.63■■■□□ 2.33
CPNE1-217ENST00000439669 PPP2R3BQ9Y5P8 575 aa29.63■■■□□ 2.33
CPNE1-217ENST00000439669 ZNF157P51786 506 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-217ENST00000439669 MAP2K1Q02750 393 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-217ENST00000439669 MOB2Q70IA6 237 aa29.62■■■□□ 2.33
CPNE1-217ENST00000439669 CHMP4BQ9H444 224 aaKnown RBP29.62■■■□□ 2.33
CPNE1-217ENST00000439669 NOP58Q9Y2X3 529 aaKnown RBP29.62■■■□□ 2.33
CPNE1-217ENST00000439669 LDHBP07195 334 aaKnown RBP29.61■■■□□ 2.33
CPNE1-217ENST00000439669 PRDX5P30044 214 aa29.61■■■□□ 2.33
CPNE1-217ENST00000439669 MAP2K2P36507 400 aa29.61■■■□□ 2.33
CPNE1-217ENST00000439669 TNFAIP1Q13829 316 aa29.61■■■□□ 2.33
CPNE1-217ENST00000439669 PDE3AQ14432 1141 aa29.61■■■□□ 2.33
CPNE1-217ENST00000439669 C20orf194Q5TEA3 1177 aa29.61■■■□□ 2.33
CPNE1-217ENST00000439669 PRKG1Q13976 671 aa29.6■■■□□ 2.33
CPNE1-217ENST00000439669 TNNI3KQ59H18 835 aa29.6■■■□□ 2.33
CPNE1-217ENST00000439669 ZDHHC15Q96MV8 337 aa29.6■■■□□ 2.33
CPNE1-217ENST00000439669 WBP1LQ9NX94 342 aa29.6■■■□□ 2.33
CPNE1-217ENST00000439669 FPGT-TNNI3KV9GXZ4 949 aa29.6■■■□□ 2.33
CPNE1-217ENST00000439669 SALL1Q9NSC2 1324 aa29.6■■■□□ 2.33
CPNE1-217ENST00000439669 UBE2Q2LH0YL09 131 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 ZBTB22O15209 634 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 NOGQ13253 232 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 RASA3Q14644 834 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 ZGPATQ8N5A5 531 aaKnown RBP29.59■■■□□ 2.33
CPNE1-217ENST00000439669 CCDC102AQ96A19 550 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 MRIQ9BWK5 157 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 GPR108Q9NPR9 543 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 ZBTB40Q9NUA8 1239 aa29.59■■■□□ 2.33
CPNE1-217ENST00000439669 FOXN1O15353 648 aa29.58■■■□□ 2.33
CPNE1-217ENST00000439669 HHIPL2Q6UWX4 724 aa29.58■■■□□ 2.33
CPNE1-217ENST00000439669 ARMC9Q7Z3E5 817 aa29.58■■■□□ 2.33
CPNE1-217ENST00000439669 PDS5AQ29RF7 1337 aaKnown RBP29.57■■■□□ 2.32
CPNE1-217ENST00000439669 TCP10L2B9ZVM9 353 aa29.57■■■□□ 2.32
CPNE1-217ENST00000439669 DIXDC1Q155Q3 683 aa29.57■■■□□ 2.32
CPNE1-217ENST00000439669 BEGAINQ9BUH8 593 aa29.57■■■□□ 2.32
CPNE1-217ENST00000439669 TMOD2Q9NZR1 351 aa29.57■■■□□ 2.32
CPNE1-217ENST00000439669 ABCF2Q9UG63 623 aa29.57■■■□□ 2.32
CPNE1-217ENST00000439669 EXOC6BQ9Y2D4 811 aa29.57■■■□□ 2.32
CPNE1-217ENST00000439669 FAM155AB1AL88 458 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-217ENST00000439669 TNNI2P48788 182 aa29.56■■■□□ 2.32
CPNE1-217ENST00000439669 SUPT20HL1Q3ZLR7 823 aa29.56■■■□□ 2.32
CPNE1-217ENST00000439669 APOBEC3HQ6NTF7 200 aaKnown RBP29.56■■■□□ 2.32
CPNE1-217ENST00000439669 SLC10A3P09131 477 aa29.55■■■□□ 2.32
CPNE1-217ENST00000439669 CACNB3P54284 484 aa29.55■■■□□ 2.32
CPNE1-217ENST00000439669 RPAP2Q8IXW5 612 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-217ENST00000439669 ANGEL1Q9UNK9 670 aaKnown RBP29.55■■■□□ 2.32
CPNE1-217ENST00000439669 HMMRO75330 724 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 ARID4AP29374 1257 aaPredicted RBP29.54■■■□□ 2.32
CPNE1-217ENST00000439669 NBPF12Q5TAG4 269 aaPredicted RBP29.54■■■□□ 2.32
CPNE1-217ENST00000439669 DZIP1Q86YF9 867 aaKnown RBP29.54■■■□□ 2.32
CPNE1-217ENST00000439669 RASAL3Q86YV0 1011 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 ERC1Q8IUD2 1116 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 ZIC5Q96T25 663 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 DBNDD2Q9BQY9 259 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 HMG20BQ9P0W2 317 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 FZD1Q9UP38 647 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 DAGLAQ9Y4D2 1042 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 SSC5DA1L4H1 1573 aa29.54■■■□□ 2.32
CPNE1-217ENST00000439669 UQCRFS1P1P0C7P4 283 aa29.53■■■□□ 2.32
CPNE1-217ENST00000439669 CTCFP49711 727 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-217ENST00000439669 TTC39AQ5SRH9 613 aa29.53■■■□□ 2.32
CPNE1-217ENST00000439669 SPTY2D1Q68D10 685 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-217ENST00000439669 SPATA5Q8NB90 893 aa29.53■■■□□ 2.32
CPNE1-217ENST00000439669 PPP1R12BO60237 982 aaPredicted RBP29.52■■■□□ 2.32
CPNE1-217ENST00000439669 HSP90AB4PQ58FF6 505 aa29.52■■■□□ 2.32
CPNE1-217ENST00000439669 CCDC158Q5M9N0 1113 aa29.52■■■□□ 2.32
CPNE1-217ENST00000439669 PI16Q6UXB8 463 aa29.52■■■□□ 2.32
CPNE1-217ENST00000439669 TMEM39BQ9GZU3 492 aa29.51■■■□□ 2.31
CPNE1-217ENST00000439669 MCAMP43121 646 aa29.5■■■□□ 2.31
CPNE1-217ENST00000439669 KIF23Q02241 960 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-217ENST00000439669 ERICH6Q7L0X2 663 aa29.5■■■□□ 2.31
CPNE1-217ENST00000439669 PCNTO95613 3336 aa29.5■■■□□ 2.31
CPNE1-217ENST00000439669 SIRT2Q8IXJ6 389 aa29.49■■■□□ 2.31
CPNE1-217ENST00000439669 CCDC8Q9H0W5 538 aaPredicted RBP29.49■■■□□ 2.31
CPNE1-217ENST00000439669 DBNLQ9UJU6 430 aaKnown RBP29.49■■■□□ 2.31
CPNE1-217ENST00000439669 CDAN1Q8IWY9 1227 aa29.48■■■□□ 2.31
CPNE1-217ENST00000439669 SLF2Q8IX21 1173 aa29.48■■■□□ 2.31
CPNE1-217ENST00000439669 EAF2Q96CJ1 260 aaPredicted RBP29.48■■■□□ 2.31
CPNE1-217ENST00000439669 TEPSINQ96N21 525 aa29.48■■■□□ 2.31
CPNE1-217ENST00000439669 TLR7Q9NYK1 1049 aaKnown RBP29.48■■■□□ 2.31
CPNE1-217ENST00000439669 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.48■■■□□ 2.31
CPNE1-217ENST00000439669 APBB1O00213 710 aa29.47■■■□□ 2.31
CPNE1-217ENST00000439669 LDLRAD1Q5T700 205 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms