RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 FKBPLQ9UIM3 349 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZBTB1Q9Y2K1 713 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 V9GY48 417 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 CDHR2Q9BYE9 1310 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 CNTNAP4Q9C0A0 1308 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 LY75O60449 1722 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 BRWD3Q6RI45 1802 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 TAF1LQ8IZX4 1826 aa4.86□□□□□ -1.63
HMGB1P37-201ENST00000439613 AK9Q5TCS8 1911 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 ERC2O15083 957 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 SMARCA5O60264 1052 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 RPS6KA4O75676 772 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 IFIT2P09913 472 aaKnown RBP4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 MX1P20591 662 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 PDE1AP54750 535 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 FOXO4P98177 505 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 TRIM32Q13049 653 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 IRF5Q13568 498 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 SLC27A3Q5K4L6 730 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 SPRYD7Q5W111 196 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 LMBR1LQ6UX01 489 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 NLRP10Q86W26 655 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 C16orf71Q8IYS4 520 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 TRMT112Q9UI30 125 aaKnown RBP4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 CCNL1Q9UK58 526 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 TTC41PQ6P2S7 1318 aa4.85□□□□□ -1.63
HMGB1P37-201ENST00000439613 SALL3Q9BXA9 1300 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 USP42Q9H9J4 1324 aaKnown RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 POM121CA8CG34 1229 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 IRS4O14654 1257 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 PDE8AO60658 829 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 GLRX3O76003 335 aaKnown RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 CIAO1O76071 339 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 CAMTA2O94983 1202 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 CSF1RP07333 972 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 RXRBP28702 533 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 IL15P40933 162 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 RFX5P48382 616 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 VAC14Q08AM6 782 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 HLFQ16534 295 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 CCDC57Q2TAC2 916 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 EPHA10Q5JZY3 1008 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 ZNF598Q86UK7 904 aaKnown RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 TICAM2Q86XR7 235 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 LINC00116Q8NCU8 138 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 FBXO41Q8TF61 875 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 GPKOWQ92917 476 aaPredicted RBP eCLIP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 UTP14AQ9BVJ6 771 aaKnown RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 GPR108Q9NPR9 543 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 ECHDC1Q9NTX5 307 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 NARFQ9UHQ1 456 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 CHMP3Q9Y3E7 222 aa4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 RTCBQ9Y3I0 505 aaKnown RBP4.84□□□□□ -1.63
HMGB1P37-201ENST00000439613 BCORQ6W2J9 1755 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 SH3TC1Q8TE82 1336 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 ZC3H4Q9UPT8 1303 aaKnown RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 A6NJR5 290 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 EYA2O00167 538 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 TRAK2O60296 914 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 SASH1O94885 1247 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 SDSP20132 328 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 GPTP24298 496 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 CTSWP56202 376 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 WNT7BP56706 349 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 SH3BP2P78314 561 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 PTPN12Q05209 780 aaKnown RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 IFIT5Q13325 482 aaKnown RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 TAF7LQ5H9L4 462 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 TRAPPC3LQ5T215 181 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 FAM182BQ5T319 152 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 PDXDC2PQ6P474 469 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 TBC1D9Q6ZT07 1266 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 AACSQ86V21 672 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 ZNF511Q8NB15 262 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 TTLL11Q8NHH1 800 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 OTUD7AQ8TE49 926 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 JARID2Q92833 1246 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 FAM89AQ96GI7 184 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 IPO9Q96P70 1041 aaKnown RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 NYXQ9GZU5 481 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 BCL11AQ9H165 835 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 SIL1Q9H173 461 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 IL1RAPL2Q9NP60 686 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 CEP126Q9P2H0 1117 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 PA2G4Q9UQ80 394 aaKnown RBP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 NIP7Q9Y221 180 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 AKAP2Q9Y2D5 859 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 TUBGCP6Q96RT7 1819 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 C4BP0C0L5 1744 aa4.83□□□□□ -1.64
HMGB1P37-201ENST00000439613 RTL9Q8NET4 1388 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 ANKRD18BA2A2Z9 1011 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 HIP1O00291 1037 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 EPB41L2O43491 1005 aaKnown RBP4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 TRIM37O94972 964 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 REC8O95072 547 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 RFC4P35249 363 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 SKOR1P84550 965 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 TFCP2Q12800 502 aa4.82□□□□□ -1.64
HMGB1P37-201ENST00000439613 BECN1Q14457 450 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms