RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 TMEM39BQ9GZU3 492 aa17.15■□□□□ 0.34
PTPN7-203ENST00000435759 AKAP11Q9UKA4 1901 aa17.14■□□□□ 0.33
PTPN7-203ENST00000435759 MANSC4A6NHS7 340 aaPredicted RBP17.14■□□□□ 0.33
PTPN7-203ENST00000435759 FGFR2P21802 821 aa17.14■□□□□ 0.33
PTPN7-203ENST00000435759 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
PTPN7-203ENST00000435759 ELP3Q9H9T3 547 aa17.14■□□□□ 0.33
PTPN7-203ENST00000435759 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-203ENST00000435759 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
PTPN7-203ENST00000435759 INHBEP58166 350 aa17.13■□□□□ 0.33
PTPN7-203ENST00000435759 CAVIN4Q5BKX8 364 aa17.13■□□□□ 0.33
PTPN7-203ENST00000435759 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
PTPN7-203ENST00000435759 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.13■□□□□ 0.33
PTPN7-203ENST00000435759 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-203ENST00000435759 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
PTPN7-203ENST00000435759 PKN2Q16513 984 aaKnown RBP17.12■□□□□ 0.33
PTPN7-203ENST00000435759 ALDH1L2Q3SY69 923 aa17.12■□□□□ 0.33
PTPN7-203ENST00000435759 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
PTPN7-203ENST00000435759 ANKRD13AQ8IZ07 590 aa17.12■□□□□ 0.33
PTPN7-203ENST00000435759 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
PTPN7-203ENST00000435759 UNCXA6NJT0 531 aa17.11■□□□□ 0.33
PTPN7-203ENST00000435759 EYA2O00167 538 aa17.11■□□□□ 0.33
PTPN7-203ENST00000435759 CAP1Q01518 475 aa17.11■□□□□ 0.33
PTPN7-203ENST00000435759 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
PTPN7-203ENST00000435759 SMC4Q9NTJ3 1288 aa17.11■□□□□ 0.33
PTPN7-203ENST00000435759 A0A1B0GUL6 1792 aa17.1■□□□□ 0.33
PTPN7-203ENST00000435759 TESPA1A2RU30 521 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-203ENST00000435759 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
PTPN7-203ENST00000435759 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
PTPN7-203ENST00000435759 FBXO46Q6PJ61 603 aaPredicted RBP17.1■□□□□ 0.33
PTPN7-203ENST00000435759 OPTNQ96CV9 577 aa17.1■□□□□ 0.33
PTPN7-203ENST00000435759 MS4A4AQ96JQ5 239 aa17.1■□□□□ 0.33
PTPN7-203ENST00000435759 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
PTPN7-203ENST00000435759 MAP3K9P80192 1104 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 HDLBPQ00341 1268 aaKnown RBP17.09■□□□□ 0.33
PTPN7-203ENST00000435759 CRHR2Q13324 411 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 TNFAIP1Q13829 316 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 ZDHHC15Q96MV8 337 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 MRIQ9BWK5 157 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 SIL1Q9H173 461 aa17.09■□□□□ 0.33
PTPN7-203ENST00000435759 VGLL4Q14135 290 aa17.08■□□□□ 0.32
PTPN7-203ENST00000435759 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.08■□□□□ 0.32
PTPN7-203ENST00000435759 HTTP42858 3142 aa17.08■□□□□ 0.32
PTPN7-203ENST00000435759 TNNI2P48788 182 aa17.07■□□□□ 0.32
PTPN7-203ENST00000435759 OTOP1Q7RTM1 612 aa17.07■□□□□ 0.32
PTPN7-203ENST00000435759 BRI3BPQ8WY22 251 aa17.07■□□□□ 0.32
PTPN7-203ENST00000435759 LPIN2Q92539 896 aa17.07■□□□□ 0.32
PTPN7-203ENST00000435759 PA2G4Q9UQ80 394 aaKnown RBP17.07■□□□□ 0.32
PTPN7-203ENST00000435759 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
PTPN7-203ENST00000435759 SLC5A1P13866 664 aa17.06■□□□□ 0.32
PTPN7-203ENST00000435759 CD99L2Q8TCZ2 262 aa17.06■□□□□ 0.32
PTPN7-203ENST00000435759 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
PTPN7-203ENST00000435759 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
PTPN7-203ENST00000435759 CENPFP49454 3210 aa17.06■□□□□ 0.32
PTPN7-203ENST00000435759 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
PTPN7-203ENST00000435759 OTUD7BQ6GQQ9 843 aa17.05■□□□□ 0.32
PTPN7-203ENST00000435759 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
PTPN7-203ENST00000435759 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
PTPN7-203ENST00000435759 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 ADORA1P30542 326 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 RARSP54136 660 aaKnown RBP17.04■□□□□ 0.32
PTPN7-203ENST00000435759 DIXDC1Q155Q3 683 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 FAM43AQ8N2R8 423 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 MEIS3Q99687 375 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 CEP126Q9P2H0 1117 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 SUGT1Q9Y2Z0 365 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 SNCAIPQ9Y6H5 919 aa17.04■□□□□ 0.32
PTPN7-203ENST00000435759 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 PHKA1P46020 1223 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 TIMM10P62072 90 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 SP3Q02447 781 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 CCL15Q16663 113 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 CDC42EP5Q6NZY7 148 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 FAM83AQ86UY5 434 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 ZFPM1Q8IX07 1006 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 PTPN22Q9Y2R2 807 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 CSADQ9Y600 493 aa17.03■□□□□ 0.32
PTPN7-203ENST00000435759 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
PTPN7-203ENST00000435759 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.32
PTPN7-203ENST00000435759 CIAO1O76071 339 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 PRDX5P30044 214 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 GTF2A2P52657 109 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 TCP10Q12799 353 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 NFIAQ12857 509 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 FKBP1CQ5VVH2 108 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 WRNIP1Q96S55 665 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
PTPN7-203ENST00000435759 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 DAGLAQ9Y4D2 1042 aa17.02■□□□□ 0.32
PTPN7-203ENST00000435759 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 SPDYE5A6NIY4 337 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 IRF6O14896 467 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 SLC34A2O95436 690 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 INPP5BP32019 993 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 ERO1AQ96HE7 468 aa17.01■□□□□ 0.31
PTPN7-203ENST00000435759 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms