RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 IGF2BP3O00425 579 aaKnown RBP eCLIP19.01■□□□□ 0.63
CSNK1E-208ENST00000431611 TNNI2P48788 182 aa19.01■□□□□ 0.63
CSNK1E-208ENST00000431611 GRIK5Q16478 980 aa19.01■□□□□ 0.63
CSNK1E-208ENST00000431611 KLHDC4Q8TBB5 520 aa19.01■□□□□ 0.63
CSNK1E-208ENST00000431611 TBC1D22AQ8WUA7 517 aa19.01■□□□□ 0.63
CSNK1E-208ENST00000431611 USP44Q9H0E7 712 aa19.01■□□□□ 0.63
CSNK1E-208ENST00000431611 HDLBPQ00341 1268 aaKnown RBP19■□□□□ 0.63
CSNK1E-208ENST00000431611 OTUD7BQ6GQQ9 843 aa19■□□□□ 0.63
CSNK1E-208ENST00000431611 VGLL2Q8N8G2 317 aa19■□□□□ 0.63
CSNK1E-208ENST00000431611 TEPSINQ96N21 525 aa19■□□□□ 0.63
CSNK1E-208ENST00000431611 GJA5P36382 358 aa18.99■□□□□ 0.63
CSNK1E-208ENST00000431611 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
CSNK1E-208ENST00000431611 CDAN1Q8IWY9 1227 aa18.99■□□□□ 0.63
CSNK1E-208ENST00000431611 TMEM39BQ9GZU3 492 aa18.99■□□□□ 0.63
CSNK1E-208ENST00000431611 ELP3Q9H9T3 547 aa18.99■□□□□ 0.63
CSNK1E-208ENST00000431611 ECM29Q5VYK3 1845 aa18.98■□□□□ 0.63
CSNK1E-208ENST00000431611 BCAMP50895 628 aa18.98■□□□□ 0.63
CSNK1E-208ENST00000431611 TEKT1Q969V4 418 aa18.98■□□□□ 0.63
CSNK1E-208ENST00000431611 OPTNQ96CV9 577 aa18.98■□□□□ 0.63
CSNK1E-208ENST00000431611 TESPA1A2RU30 521 aaPredicted RBP18.97■□□□□ 0.63
CSNK1E-208ENST00000431611 SLC34A2O95436 690 aa18.97■□□□□ 0.63
CSNK1E-208ENST00000431611 IFIT1P09914 478 aaKnown RBP18.97■□□□□ 0.63
CSNK1E-208ENST00000431611 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
CSNK1E-208ENST00000431611 ALDH1L2Q3SY69 923 aa18.97■□□□□ 0.63
CSNK1E-208ENST00000431611 TRIM17Q9Y577 477 aa18.97■□□□□ 0.63
CSNK1E-208ENST00000431611 FGFR2P21802 821 aa18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 MAP3K9P80192 1104 aa18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 CRHR2Q13324 411 aa18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 PTPN18Q99952 460 aa18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 KIF16BQ96L93 1317 aa18.96■□□□□ 0.63
CSNK1E-208ENST00000431611 EYA2O00167 538 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 CACNB3P54284 484 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 OTOP1Q7RTM1 612 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 ERO1AQ96HE7 468 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 SMC4Q9NTJ3 1288 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 TMOD2Q9NZR1 351 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 SUGT1Q9Y2Z0 365 aa18.95■□□□□ 0.62
CSNK1E-208ENST00000431611 RFX5P48382 616 aaPredicted RBP18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 VGLL4Q14135 290 aa18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 MS4A4AQ96JQ5 239 aa18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 CSADQ9Y600 493 aa18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 MAST3O60307 1309 aa18.94■□□□□ 0.62
CSNK1E-208ENST00000431611 SLC5A1P13866 664 aa18.93■□□□□ 0.62
CSNK1E-208ENST00000431611 APOBEC3HQ6NTF7 200 aaKnown RBP18.93■□□□□ 0.62
CSNK1E-208ENST00000431611 CD99L2Q8TCZ2 262 aa18.93■□□□□ 0.62
CSNK1E-208ENST00000431611 LPIN2Q92539 896 aa18.93■□□□□ 0.62
CSNK1E-208ENST00000431611 CCL15-CCL14A0A0B4J2E2 113 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 UBTFL1P0CB47 393 aaPredicted RBP18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 GTF2A2P52657 109 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 SP3Q02447 781 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 CCL15Q16663 113 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 FKBP1CQ5VVH2 108 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 HHIPL2Q6UWX4 724 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 FAM83AQ86UY5 434 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 WDR66Q8TBY9 1149 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
CSNK1E-208ENST00000431611 ARAP2Q8WZ64 1704 aa18.91■□□□□ 0.62
CSNK1E-208ENST00000431611 ATG9AQ7Z3C6 839 aa18.91■□□□□ 0.62
CSNK1E-208ENST00000431611 HOOK2Q96ED9 719 aa18.91■□□□□ 0.62
CSNK1E-208ENST00000431611 OTUD5Q96G74 571 aa18.91■□□□□ 0.62
CSNK1E-208ENST00000431611 EFCC1Q9HA90 598 aa18.91■□□□□ 0.62
CSNK1E-208ENST00000431611 SPDYE5A6NIY4 337 aa18.9■□□□□ 0.62
CSNK1E-208ENST00000431611 TRMT2AQ8IZ69 625 aaKnown RBP18.9■□□□□ 0.62
CSNK1E-208ENST00000431611 ZFYVE28Q9HCC9 887 aa18.9■□□□□ 0.62
CSNK1E-208ENST00000431611 FBXO3Q9UK99 471 aa18.9■□□□□ 0.62
CSNK1E-208ENST00000431611 PTPN22Q9Y2R2 807 aa18.9■□□□□ 0.62
CSNK1E-208ENST00000431611 TAF1CQ15572 869 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 PRPF38BQ5VTL8 546 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 INTS3Q68E01 1043 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 WRNIP1Q96S55 665 aa18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 SIL1Q9H173 461 aa18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 CEP126Q9P2H0 1117 aa18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 NOB1Q9ULX3 412 aaKnown RBP18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 TNRC18O15417 2968 aaPredicted RBP18.89■□□□□ 0.61
CSNK1E-208ENST00000431611 CIAO1O76071 339 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 CT47B1P0C2W7 299 aaPredicted RBP18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 ATP2B3Q16720 1220 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 DCAF15Q66K64 600 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 ERO1BQ86YB8 467 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 FAM43AQ8N2R8 423 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 ZKSCAN4Q969J2 545 aaPredicted RBP18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 API5Q9BZZ5 524 aaKnown RBP18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 HDAC5Q9UQL6 1122 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 SNCAIPQ9Y6H5 919 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 LAMB1P07942 1786 aa18.88■□□□□ 0.61
CSNK1E-208ENST00000431611 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
CSNK1E-208ENST00000431611 ARHGEF6Q15052 776 aa18.87■□□□□ 0.61
CSNK1E-208ENST00000431611 GNL3LQ9NVN8 582 aaKnown RBP18.87■□□□□ 0.61
CSNK1E-208ENST00000431611 OTOFQ9HC10 1997 aa18.86■□□□□ 0.61
CSNK1E-208ENST00000431611 RPAP1Q9BWH6 1393 aaPredicted RBP18.86■□□□□ 0.61
CSNK1E-208ENST00000431611 CETPP11597 493 aa18.86■□□□□ 0.61
CSNK1E-208ENST00000431611 FAM151AQ8WW52 585 aa18.86■□□□□ 0.61
CSNK1E-208ENST00000431611 ZNF341Q9BYN7 854 aa18.86■□□□□ 0.61
CSNK1E-208ENST00000431611 DAGLAQ9Y4D2 1042 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms