RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 MAOBP27338 520 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 KCNA1Q09470 495 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 LRP8Q14114 963 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 POU4F3Q15319 338 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 PRPF40BQ6NWY9 871 aaKnown RBP9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 FAM83CQ9BQN1 747 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 NRSN2Q9GZP1 204 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
HMGB3P5-201ENST00000428894 CCDC180Q9P1Z9 1646 aa9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 HYAL3O43820 417 aaPredicted RBP9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 B3GALT4O96024 378 aa9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 GRM2Q14416 872 aa9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 DSC3Q14574 896 aa9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 BEND4Q6ZU67 534 aa9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 NLRP2Q9NX02 1062 aa9.14□□□□□ -0.95
HMGB3P5-201ENST00000428894 TIAF1O95411 115 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 CTSBP07858 339 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 DRD2P14416 443 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 NFIAQ12857 509 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 SGO2Q562F6 1265 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 RNF43Q68DV7 783 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 PI16Q6UXB8 463 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 GLIS3Q8NEA6 775 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
HMGB3P5-201ENST00000428894 TREHO43280 583 aa9.12□□□□□ -0.95
HMGB3P5-201ENST00000428894 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
HMGB3P5-201ENST00000428894 RXRBP28702 533 aa9.12□□□□□ -0.95
HMGB3P5-201ENST00000428894 TRIM56Q9BRZ2 755 aaKnown RBP9.12□□□□□ -0.95
HMGB3P5-201ENST00000428894 PPP4R2Q9NY27 417 aa9.12□□□□□ -0.95
HMGB3P5-201ENST00000428894 PNMA6FA0A0J9YX94 578 aa9.11□□□□□ -0.95
HMGB3P5-201ENST00000428894 ZNF157P51786 506 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P5-201ENST00000428894 SOX4Q06945 474 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P5-201ENST00000428894 RPS26P11Q5JNZ5 115 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P5-201ENST00000428894 CORO1BQ9BR76 489 aa9.11□□□□□ -0.95
HMGB3P5-201ENST00000428894 ZFYVE1Q9HBF4 777 aa9.11□□□□□ -0.95
HMGB3P5-201ENST00000428894 ECEL1O95672 775 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 USP11P51784 963 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 FCGRTP55899 365 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 ENOX2Q16206 610 aaKnown RBP9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 HP1BP3Q5SSJ5 553 aaPredicted RBP9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 DTHD1Q6ZMT9 781 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 ZSCAN29Q8IWY8 852 aaPredicted RBP9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 DBNDD2Q9BQY9 259 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 RAD18Q9NS91 495 aa9.1□□□□□ -0.95
HMGB3P5-201ENST00000428894 SSTR4P31391 388 aa9.09□□□□□ -0.95
HMGB3P5-201ENST00000428894 FAAP100Q0VG06 881 aa9.09□□□□□ -0.95
HMGB3P5-201ENST00000428894 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.09□□□□□ -0.95
HMGB3P5-201ENST00000428894 ZDHHC13Q8IUH4 622 aa9.09□□□□□ -0.95
HMGB3P5-201ENST00000428894 C2CD4AQ8NCU7 369 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P5-201ENST00000428894 BCO2Q9BYV7 579 aa9.09□□□□□ -0.95
HMGB3P5-201ENST00000428894 TGFB1P01137 390 aa9.08□□□□□ -0.96
HMGB3P5-201ENST00000428894 AP3B2Q13367 1082 aa9.08□□□□□ -0.96
HMGB3P5-201ENST00000428894 AKAP4Q5JQC9 854 aa9.08□□□□□ -0.96
HMGB3P5-201ENST00000428894 CDPF1Q6NVV7 123 aa9.08□□□□□ -0.96
HMGB3P5-201ENST00000428894 ADH5P11766 374 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 MAPK8P45983 427 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 NFKBIBQ15653 356 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 SHKBP1Q8TBC3 707 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 FBLIM1Q8WUP2 373 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 PCMTD2Q9NV79 361 aa9.07□□□□□ -0.96
HMGB3P5-201ENST00000428894 FAM95CA0A1B0GW59 222 aa9.06□□□□□ -0.96
HMGB3P5-201ENST00000428894 NXPE4Q6UWF7 544 aa9.06□□□□□ -0.96
HMGB3P5-201ENST00000428894 DYMQ7RTS9 669 aa9.06□□□□□ -0.96
HMGB3P5-201ENST00000428894 MFSD14AQ96MC6 490 aa9.06□□□□□ -0.96
HMGB3P5-201ENST00000428894 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
HMGB3P5-201ENST00000428894 PRR19A6NJB7 356 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 WDR64B1ANS9 1081 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 PATL2C9JE40 543 aaKnown RBP9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 COBLO75128 1261 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 PAOXQ6QHF9 649 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 YIPF2Q9BWQ6 316 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 ZC3H12CQ9C0D7 883 aaKnown RBP9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 GPN3Q9UHW5 284 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 AKAP2Q9Y2D5 859 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 ACTL7BQ9Y614 415 aa9.05□□□□□ -0.96
HMGB3P5-201ENST00000428894 AOC2O75106 756 aa9.04□□□□□ -0.96
HMGB3P5-201ENST00000428894 MED26O95402 600 aa9.04□□□□□ -0.96
HMGB3P5-201ENST00000428894 PPP2R3AQ06190 1150 aa9.04□□□□□ -0.96
HMGB3P5-201ENST00000428894 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGB3P5-201ENST00000428894 AP4E1Q9UPM8 1137 aa9.04□□□□□ -0.96
HMGB3P5-201ENST00000428894 LIG1P18858 919 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 CD97P48960 835 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 FBXL6Q8N531 539 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 GIMAP7Q8NHV1 300 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 SETDB2Q96T68 719 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 WDR18Q9BV38 432 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 ATG3Q9NT62 314 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 TMEM39AQ9NV64 488 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 WWC3Q9ULE0 1092 aa9.03□□□□□ -0.96
HMGB3P5-201ENST00000428894 RAB6AP20340 208 aa9.02□□□□□ -0.97
HMGB3P5-201ENST00000428894 GRIK1P39086 918 aa9.02□□□□□ -0.97
HMGB3P5-201ENST00000428894 ASPAP45381 313 aa9.02□□□□□ -0.97
HMGB3P5-201ENST00000428894 FBF1Q8TES7 1133 aa9.02□□□□□ -0.97
HMGB3P5-201ENST00000428894 EZH1Q92800 747 aaPredicted RBP9.02□□□□□ -0.97
HMGB3P5-201ENST00000428894 CCDC86Q9H6F5 360 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms