RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 TDRD7Q8NHU6 1098 aaKnown RBP17.28■□□□□ 0.36
VEGFB-202ENST00000426086 SH3TC2Q8TF17 1288 aa17.28■□□□□ 0.36
VEGFB-202ENST00000426086 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
VEGFB-202ENST00000426086 H0YGN5 161 aa17.27■□□□□ 0.36
VEGFB-202ENST00000426086 SLC4A8Q2Y0W8 1093 aa17.27■□□□□ 0.36
VEGFB-202ENST00000426086 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.36
VEGFB-202ENST00000426086 OTUD5Q96G74 571 aa17.27■□□□□ 0.36
VEGFB-202ENST00000426086 ZFYVE28Q9HCC9 887 aa17.27■□□□□ 0.36
VEGFB-202ENST00000426086 ECM2O94769 699 aaPredicted RBP17.26■□□□□ 0.35
VEGFB-202ENST00000426086 CACNB3P54284 484 aa17.26■□□□□ 0.35
VEGFB-202ENST00000426086 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
VEGFB-202ENST00000426086 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
VEGFB-202ENST00000426086 LDHAL6AQ6ZMR3 332 aa17.26■□□□□ 0.35
VEGFB-202ENST00000426086 CENPFP49454 3210 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 BRCA2P51587 3418 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 CTGFP29279 349 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 CRKP46108 304 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 GTF2A2P52657 109 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 TNFAIP1Q13829 316 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 FAM84BQ96KN1 310 aaPredicted RBP17.25■□□□□ 0.35
VEGFB-202ENST00000426086 PUS3Q9BZE2 481 aaKnown RBP17.25■□□□□ 0.35
VEGFB-202ENST00000426086 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 SNCAIPQ9Y6H5 919 aa17.25■□□□□ 0.35
VEGFB-202ENST00000426086 VAMP4O75379 141 aa17.24■□□□□ 0.35
VEGFB-202ENST00000426086 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
VEGFB-202ENST00000426086 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
VEGFB-202ENST00000426086 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
VEGFB-202ENST00000426086 IQSEC3Q9UPP2 1182 aaPredicted RBP17.24■□□□□ 0.35
VEGFB-202ENST00000426086 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
VEGFB-202ENST00000426086 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
VEGFB-202ENST00000426086 TLR2O60603 784 aa17.23■□□□□ 0.35
VEGFB-202ENST00000426086 MTFR1Q15390 333 aa17.23■□□□□ 0.35
VEGFB-202ENST00000426086 CCDC27Q2M243 656 aa17.23■□□□□ 0.35
VEGFB-202ENST00000426086 FANCIQ9NVI1 1328 aa17.22■□□□□ 0.35
VEGFB-202ENST00000426086 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
VEGFB-202ENST00000426086 LACTBP83111 547 aaPredicted RBP17.22■□□□□ 0.35
VEGFB-202ENST00000426086 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
VEGFB-202ENST00000426086 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
VEGFB-202ENST00000426086 CSADQ9Y600 493 aa17.22■□□□□ 0.35
VEGFB-202ENST00000426086 IRF6O14896 467 aa17.21■□□□□ 0.35
VEGFB-202ENST00000426086 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
VEGFB-202ENST00000426086 TAF7LQ5H9L4 462 aa17.21■□□□□ 0.35
VEGFB-202ENST00000426086 CHRDL2Q6WN34 429 aa17.21■□□□□ 0.35
VEGFB-202ENST00000426086 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
VEGFB-202ENST00000426086 GRM8O00222 908 aa17.2■□□□□ 0.34
VEGFB-202ENST00000426086 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
VEGFB-202ENST00000426086 IL16Q14005 1332 aa17.2■□□□□ 0.34
VEGFB-202ENST00000426086 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 CETPP11597 493 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 TNNI2P48788 182 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
VEGFB-202ENST00000426086 ARHGEF6Q15052 776 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 ERO1BQ86YB8 467 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 WRNIP1Q96S55 665 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 RBM27Q9P2N5 1060 aaKnown RBP17.19■□□□□ 0.34
VEGFB-202ENST00000426086 CPA4Q9UI42 421 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
VEGFB-202ENST00000426086 C17orf99Q6UX52 265 aa17.18■□□□□ 0.34
VEGFB-202ENST00000426086 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
VEGFB-202ENST00000426086 INPP5BP32019 993 aa17.17■□□□□ 0.34
VEGFB-202ENST00000426086 TRIM47Q96LD4 638 aa17.17■□□□□ 0.34
VEGFB-202ENST00000426086 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
VEGFB-202ENST00000426086 ADGRA2Q96PE1 1338 aa17.17■□□□□ 0.34
VEGFB-202ENST00000426086 PPIL2Q13356 520 aa17.16■□□□□ 0.34
VEGFB-202ENST00000426086 SNAPC2Q13487 334 aa17.16■□□□□ 0.34
VEGFB-202ENST00000426086 KIF22Q14807 665 aa17.16■□□□□ 0.34
VEGFB-202ENST00000426086 LRRC24Q50LG9 513 aa17.16■□□□□ 0.34
VEGFB-202ENST00000426086 APOBEC3HQ6NTF7 200 aaKnown RBP17.16■□□□□ 0.34
VEGFB-202ENST00000426086 MIGA2Q7L4E1 593 aa17.16■□□□□ 0.34
VEGFB-202ENST00000426086 UBE2Q1Q7Z7E8 422 aa17.16■□□□□ 0.34
VEGFB-202ENST00000426086 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.16■□□□□ 0.34
VEGFB-202ENST00000426086 ZCCHC17Q9NP64 241 aaKnown RBP17.16■□□□□ 0.34
VEGFB-202ENST00000426086 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
VEGFB-202ENST00000426086 NBPF7P0C2Y1 421 aaPredicted RBP17.15■□□□□ 0.34
VEGFB-202ENST00000426086 OSBPP22059 807 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 PSMC4P43686 418 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 HDLBPQ00341 1268 aaKnown RBP17.15■□□□□ 0.34
VEGFB-202ENST00000426086 MOGSQ13724 837 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 DPF3Q92784 378 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 TEKT1Q969V4 418 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
VEGFB-202ENST00000426086 SRRDQ9UH36 339 aa17.15■□□□□ 0.34
VEGFB-202ENST00000426086 BCAMP50895 628 aa17.14■□□□□ 0.33
VEGFB-202ENST00000426086 FAM83AQ86UY5 434 aa17.14■□□□□ 0.33
VEGFB-202ENST00000426086 VGLL2Q8N8G2 317 aa17.14■□□□□ 0.33
VEGFB-202ENST00000426086 PRO3102Q9H379 93 aa17.14■□□□□ 0.33
VEGFB-202ENST00000426086 TRIOBPQ9H2D6 2365 aa17.14■□□□□ 0.33
VEGFB-202ENST00000426086 PDHXO00330 501 aa17.13■□□□□ 0.33
VEGFB-202ENST00000426086 GNRH1P01148 92 aa17.13■□□□□ 0.33
VEGFB-202ENST00000426086 PRMT2P55345 433 aa17.13■□□□□ 0.33
VEGFB-202ENST00000426086 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
VEGFB-202ENST00000426086 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 CCL5P13501 91 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 GRK4P32298 578 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 GJA8P48165 433 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 PPATQ06203 517 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
VEGFB-202ENST00000426086 VPS37DQ86XT2 251 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms