RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KINO60870 393 aaKnown RBP16.72■□□□□ 0.27
MSH5-206ENST00000423982 OTUD7BQ6GQQ9 843 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 CCDC73Q6ZRK6 1079 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 ZNF397Q8NF99 534 aaPredicted RBP16.72■□□□□ 0.27
MSH5-206ENST00000423982 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 ZNF446Q9NWS9 450 aa16.72■□□□□ 0.27
MSH5-206ENST00000423982 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
MSH5-206ENST00000423982 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
MSH5-206ENST00000423982 BIN1O00499 593 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 UTYO14607 1347 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 KRT32Q14532 448 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 TERF2Q15554 542 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 DPCR1Q3MIW9 517 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 CCDC85AQ96PX6 553 aaPredicted RBP16.7■□□□□ 0.26
MSH5-206ENST00000423982 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 IL6STP40189 918 aaPredicted RBP16.7■□□□□ 0.26
MSH5-206ENST00000423982 GABPB1Q06547 395 aaPredicted RBP16.7■□□□□ 0.26
MSH5-206ENST00000423982 ERCC6LQ2NKX8 1250 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 TNNI3KQ59H18 835 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 E4F1Q66K89 784 aaPredicted RBP16.7■□□□□ 0.26
MSH5-206ENST00000423982 FPGT-TNNI3KV9GXZ4 949 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
MSH5-206ENST00000423982 ERICH4A6NGS2 130 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 PFKFB2O60825 505 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 EIF5P55010 431 aaKnown RBP16.69■□□□□ 0.26
MSH5-206ENST00000423982 FAM160A1Q05DH4 1040 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 KRT222Q8N1A0 295 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
MSH5-206ENST00000423982 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 CAVIN2O95810 425 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 APBA3O96018 575 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 ISM2Q6H9L7 571 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 BICDL1Q6ZP65 573 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 GJB4Q9NTQ9 266 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 ANO10Q9NW15 660 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 PCDHA7Q9UN72 937 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 MYH15Q9Y2K3 1946 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 LAMA4Q16363 1823 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 SBF2Q86WG5 1849 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 ATP5JP18859 108 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 PTPN21Q16825 1174 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 SYT10Q6XYQ8 523 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 TAOK2Q9UL54 1235 aa16.69■□□□□ 0.26
MSH5-206ENST00000423982 SLU7O95391 586 aaKnown RBP16.68■□□□□ 0.26
MSH5-206ENST00000423982 NDUFA8P51970 172 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
MSH5-206ENST00000423982 MCMDC2Q4G0Z9 681 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 ARMCX5Q6P1M9 558 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 RAB11FIP4Q86YS3 637 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 CEP57L1Q8IYX8 460 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 ERO1AQ96HE7 468 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 XPO4Q9C0E2 1151 aaKnown RBP16.68■□□□□ 0.26
MSH5-206ENST00000423982 CWC25Q9NXE8 425 aaPredicted RBP16.68■□□□□ 0.26
MSH5-206ENST00000423982 U3KPZ7 1027 aaPredicted RBP16.68■□□□□ 0.26
MSH5-206ENST00000423982 CTAGE5O15320 804 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 NEMFO60524 1076 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 SMC2O95347 1197 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 TMC6Q7Z403 805 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 IFNKQ9P0W0 207 aa16.68■□□□□ 0.26
MSH5-206ENST00000423982 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
MSH5-206ENST00000423982 TCIRG1Q13488 830 aa16.67■□□□□ 0.26
MSH5-206ENST00000423982 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
MSH5-206ENST00000423982 POLR3DP05423 398 aaPredicted RBP16.67■□□□□ 0.26
MSH5-206ENST00000423982 GORABQ5T7V8 394 aa16.67■□□□□ 0.26
MSH5-206ENST00000423982 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
MSH5-206ENST00000423982 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
MSH5-206ENST00000423982 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
MSH5-206ENST00000423982 FMR1NBQ8N0W7 255 aaPredicted RBP16.67■□□□□ 0.26
MSH5-206ENST00000423982 PPP1R13BQ96KQ4 1090 aa16.67■□□□□ 0.26
MSH5-206ENST00000423982 RFX5P48382 616 aaPredicted RBP16.66■□□□□ 0.26
MSH5-206ENST00000423982 CLIC4Q9Y696 253 aa16.66■□□□□ 0.26
MSH5-206ENST00000423982 GOLIM4O00461 696 aa16.66■□□□□ 0.26
MSH5-206ENST00000423982 TTLL5Q6EMB2 1281 aa16.66■□□□□ 0.26
MSH5-206ENST00000423982 AK7Q96M32 723 aa16.66■□□□□ 0.26
MSH5-206ENST00000423982 FDPSP14324 419 aaKnown RBP16.65■□□□□ 0.26
MSH5-206ENST00000423982 AFDNP55196 1824 aaKnown RBP16.65■□□□□ 0.26
MSH5-206ENST00000423982 FAM53CQ9NYF3 392 aa16.65■□□□□ 0.26
MSH5-206ENST00000423982 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.25
MSH5-206ENST00000423982 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 PROM2Q8N271 834 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 MRPS27Q92552 414 aaKnown RBP16.64■□□□□ 0.25
MSH5-206ENST00000423982 LLPHQ9BRT6 129 aaKnown RBP16.64■□□□□ 0.25
MSH5-206ENST00000423982 NEDD4P46934 1319 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 UBN2Q6ZU65 1347 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 CAMTA2O94983 1202 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 TXNRD1Q16881 649 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 ZNF396Q96N95 335 aaPredicted RBP16.64■□□□□ 0.25
MSH5-206ENST00000423982 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
MSH5-206ENST00000423982 RTCBQ9Y3I0 505 aaKnown RBP16.64■□□□□ 0.25
MSH5-206ENST00000423982 E7EWF7 191 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
MSH5-206ENST00000423982 CCDC24Q8N4L8 307 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 HAUS7Q99871 368 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 OSBPL5Q9H0X9 879 aaPredicted RBP16.63■□□□□ 0.25
MSH5-206ENST00000423982 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
MSH5-206ENST00000423982 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms