RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TBC1D22AQ8WUA7 517 aa20.27■□□□□ 0.84
COL18A1-205ENST00000423214 CRKP46108 304 aa20.26■□□□□ 0.83
COL18A1-205ENST00000423214 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
COL18A1-205ENST00000423214 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
COL18A1-205ENST00000423214 RBBP6Q7Z6E9 1792 aaKnown RBP20.26■□□□□ 0.83
COL18A1-205ENST00000423214 TCP10L2B9ZVM9 353 aa20.25■□□□□ 0.83
COL18A1-205ENST00000423214 PDE8BO95263 885 aa20.25■□□□□ 0.83
COL18A1-205ENST00000423214 OTUD7BQ6GQQ9 843 aa20.25■□□□□ 0.83
COL18A1-205ENST00000423214 FBXO46Q6PJ61 603 aaPredicted RBP20.25■□□□□ 0.83
COL18A1-205ENST00000423214 USP2O75604 605 aaPredicted RBP20.24■□□□□ 0.83
COL18A1-205ENST00000423214 FBXO33Q7Z6M2 555 aa20.24■□□□□ 0.83
COL18A1-205ENST00000423214 VGLL2Q8N8G2 317 aa20.24■□□□□ 0.83
COL18A1-205ENST00000423214 KLHDC4Q8TBB5 520 aa20.24■□□□□ 0.83
COL18A1-205ENST00000423214 R3HDMLQ9H3Y0 253 aa20.24■□□□□ 0.83
COL18A1-205ENST00000423214 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
COL18A1-205ENST00000423214 MAST3O60307 1309 aa20.24■□□□□ 0.83
COL18A1-205ENST00000423214 DOCK2Q92608 1830 aa20.23■□□□□ 0.83
COL18A1-205ENST00000423214 IGF2BP3O00425 579 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL18A1-205ENST00000423214 IFIT1P09914 478 aaKnown RBP20.23■□□□□ 0.83
COL18A1-205ENST00000423214 PUM3Q15397 648 aaKnown RBP20.23■□□□□ 0.83
COL18A1-205ENST00000423214 TEKT1Q969V4 418 aa20.23■□□□□ 0.83
COL18A1-205ENST00000423214 ELP3Q9H9T3 547 aa20.23■□□□□ 0.83
COL18A1-205ENST00000423214 TMOD2Q9NZR1 351 aa20.23■□□□□ 0.83
COL18A1-205ENST00000423214 MYH2Q9UKX2 1941 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 OPTNQ96CV9 577 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 TMEM39BQ9GZU3 492 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 USP44Q9H0E7 712 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 KIF16BQ96L93 1317 aa20.22■□□□□ 0.83
COL18A1-205ENST00000423214 SLC5A1P13866 664 aa20.21■□□□□ 0.83
COL18A1-205ENST00000423214 GJA5P36382 358 aa20.21■□□□□ 0.83
COL18A1-205ENST00000423214 HDLBPQ00341 1268 aaKnown RBP20.21■□□□□ 0.83
COL18A1-205ENST00000423214 BCAMP50895 628 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 GRIK5Q16478 980 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 CDAN1Q8IWY9 1227 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 ERO1AQ96HE7 468 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 TEPSINQ96N21 525 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 TRIM17Q9Y577 477 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 CSADQ9Y600 493 aa20.2■□□□□ 0.82
COL18A1-205ENST00000423214 CRHR2Q13324 411 aa20.19■□□□□ 0.82
COL18A1-205ENST00000423214 EYA2O00167 538 aa20.18■□□□□ 0.82
COL18A1-205ENST00000423214 UBTFL1P0CB47 393 aaPredicted RBP20.18■□□□□ 0.82
COL18A1-205ENST00000423214 CACNB3P54284 484 aa20.18■□□□□ 0.82
COL18A1-205ENST00000423214 VGLL4Q14135 290 aa20.18■□□□□ 0.82
COL18A1-205ENST00000423214 ZDHHC15Q96MV8 337 aa20.18■□□□□ 0.82
COL18A1-205ENST00000423214 SUGT1Q9Y2Z0 365 aa20.18■□□□□ 0.82
COL18A1-205ENST00000423214 HTTP42858 3142 aa20.18■□□□□ 0.82
COL18A1-205ENST00000423214 SLC34A2O95436 690 aa20.17■□□□□ 0.82
COL18A1-205ENST00000423214 FGFR2P21802 821 aa20.17■□□□□ 0.82
COL18A1-205ENST00000423214 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.17■□□□□ 0.82
COL18A1-205ENST00000423214 OTOP1Q7RTM1 612 aa20.17■□□□□ 0.82
COL18A1-205ENST00000423214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.17■□□□□ 0.821e-8■□□□□ 9.2
COL18A1-205ENST00000423214 LPIN2Q92539 896 aa20.17■□□□□ 0.82
COL18A1-205ENST00000423214 HOOK2Q96ED9 719 aa20.17■□□□□ 0.82
COL18A1-205ENST00000423214 RPAP1Q9BWH6 1393 aaPredicted RBP20.17■□□□□ 0.82
COL18A1-205ENST00000423214 ZSWIM8A7E2V4 1837 aa20.16■□□□□ 0.82
COL18A1-205ENST00000423214 MAP3K9P80192 1104 aa20.16■□□□□ 0.82
COL18A1-205ENST00000423214 CD99L2Q8TCZ2 262 aa20.16■□□□□ 0.82
COL18A1-205ENST00000423214 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
COL18A1-205ENST00000423214 CDCA7LQ96GN5 454 aa20.16■□□□□ 0.82
COL18A1-205ENST00000423214 SIL1Q9H173 461 aa20.16■□□□□ 0.82
COL18A1-205ENST00000423214 KIAA0100Q14667 2235 aaKnown RBP20.15■□□□□ 0.82
COL18A1-205ENST00000423214 CCL15-CCL14A0A0B4J2E2 113 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 TESPA1A2RU30 521 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-205ENST00000423214 RFX5P48382 616 aaPredicted RBP20.15■□□□□ 0.82
COL18A1-205ENST00000423214 GTF2A2P52657 109 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 CCL15Q16663 113 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 FAM83AQ86UY5 434 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 WRNIP1Q96S55 665 aa20.15■□□□□ 0.82
COL18A1-205ENST00000423214 CENPFP49454 3210 aa20.14■□□□□ 0.82
COL18A1-205ENST00000423214 CT47B1P0C2W7 299 aaPredicted RBP20.14■□□□□ 0.81
COL18A1-205ENST00000423214 TAF1CQ15572 869 aaPredicted RBP20.14■□□□□ 0.81
COL18A1-205ENST00000423214 ATP2B3Q16720 1220 aa20.14■□□□□ 0.81
COL18A1-205ENST00000423214 FKBP1CQ5VVH2 108 aa20.14■□□□□ 0.81
COL18A1-205ENST00000423214 PTPN18Q99952 460 aa20.14■□□□□ 0.81
COL18A1-205ENST00000423214 MRIQ9BWK5 157 aa20.14■□□□□ 0.81
COL18A1-205ENST00000423214 WDHD1O75717 1129 aaPredicted RBP20.13■□□□□ 0.81
COL18A1-205ENST00000423214 SP3Q02447 781 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 DCAF15Q66K64 600 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 HHIPL2Q6UWX4 724 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 BRI3BPQ8WY22 251 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 MS4A4AQ96JQ5 239 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
COL18A1-205ENST00000423214 EFCC1Q9HA90 598 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 FBXO3Q9UK99 471 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 HDAC5Q9UQL6 1122 aa20.13■□□□□ 0.81
COL18A1-205ENST00000423214 SPDYE5A6NIY4 337 aa20.12■□□□□ 0.81
COL18A1-205ENST00000423214 CIAO1O76071 339 aa20.12■□□□□ 0.81
COL18A1-205ENST00000423214 PRPF38BQ5VTL8 546 aaKnown RBP20.12■□□□□ 0.81
COL18A1-205ENST00000423214 APOBEC3HQ6NTF7 200 aaKnown RBP20.12■□□□□ 0.81
COL18A1-205ENST00000423214 ATG9AQ7Z3C6 839 aa20.12■□□□□ 0.81
COL18A1-205ENST00000423214 ZFYVE28Q9HCC9 887 aa20.12■□□□□ 0.81
COL18A1-205ENST00000423214 GNL3LQ9NVN8 582 aaKnown RBP20.12■□□□□ 0.81
COL18A1-205ENST00000423214 CEP126Q9P2H0 1117 aa20.12■□□□□ 0.81
COL18A1-205ENST00000423214 ERO1BQ86YB8 467 aa20.11■□□□□ 0.81
COL18A1-205ENST00000423214 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
COL18A1-205ENST00000423214 SNCAIPQ9Y6H5 919 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms