RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 EVCP57679 992 aa24.58■■□□□ 1.53
USP48-205ENST00000421625 TIMM10P62072 90 aa24.58■■□□□ 1.53
USP48-205ENST00000421625 CFAP100Q494V2 611 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 ZCCHC17Q9NP64 241 aaKnown RBP24.57■■□□□ 1.52
USP48-205ENST00000421625 EFCAB8A8MWE9 144 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 ST5P78524 1137 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 LRRFIP1Q32MZ4 808 aaKnown RBP24.57■■□□□ 1.52
USP48-205ENST00000421625 ANO1Q5XXA6 986 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 PLCD3Q8N3E9 789 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 M0R2C6 588 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 CMA1P23946 247 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 HAND2P61296 217 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 SYNE3Q6ZMZ3 975 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 SRRTQ9BXP5 876 aaKnown RBP24.57■■□□□ 1.52
USP48-205ENST00000421625 C19orf44Q9H6X5 657 aa24.57■■□□□ 1.52
USP48-205ENST00000421625 VWA3AA6NCI4 1184 aa24.56■■□□□ 1.52
USP48-205ENST00000421625 KCNH5Q8NCM2 988 aa24.56■■□□□ 1.52
USP48-205ENST00000421625 A0A087WZG4 1122 aa24.56■■□□□ 1.52
USP48-205ENST00000421625 TBC1D8O95759 1140 aa24.56■■□□□ 1.52
USP48-205ENST00000421625 KRT28Q7Z3Y7 464 aa24.56■■□□□ 1.52
USP48-205ENST00000421625 ANKRD24Q8TF21 1146 aa24.56■■□□□ 1.52
USP48-205ENST00000421625 GCP02774 474 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 TEX35Q5T0J7 233 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 LMBR1LQ6UX01 489 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 KLF18A0A0U1RQI7 1052 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 CCDC158Q5M9N0 1113 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 BRAPQ7Z569 592 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 VSTM4Q8IW00 320 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 TAOK2Q9UL54 1235 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 HPS5Q9UPZ3 1129 aa24.55■■□□□ 1.52
USP48-205ENST00000421625 GOLGA8BA8MQT2 603 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 MYL5Q02045 173 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 PNOCQ13519 176 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 TMEM139Q8IV31 216 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 SMARCE1Q969G3 411 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 UBXN6Q9BZV1 441 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 KIF23Q02241 960 aaPredicted RBP24.54■■□□□ 1.52
USP48-205ENST00000421625 CCDC34Q96HJ3 373 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 WDR24Q96S15 920 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 PPP2R2CQ9Y2T4 447 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 TMEM94Q12767 1356 aa24.54■■□□□ 1.52
USP48-205ENST00000421625 AFDNP55196 1824 aaKnown RBP24.53■■□□□ 1.52
USP48-205ENST00000421625 OAS2P29728 719 aaKnown RBP24.53■■□□□ 1.52
USP48-205ENST00000421625 SYKP43405 635 aa24.53■■□□□ 1.52
USP48-205ENST00000421625 CC2D1AQ6P1N0 951 aaPredicted RBP24.53■■□□□ 1.52
USP48-205ENST00000421625 LRP10Q7Z4F1 713 aa24.53■■□□□ 1.52
USP48-205ENST00000421625 TUBE1Q9UJT0 475 aa24.53■■□□□ 1.52
USP48-205ENST00000421625 TOP1P11387 765 aaKnown RBP24.53■■□□□ 1.52
USP48-205ENST00000421625 RNF113AO15541 343 aaKnown RBP24.53■■□□□ 1.52
USP48-205ENST00000421625 CBFA2T2O43439 604 aa24.53■■□□□ 1.52
USP48-205ENST00000421625 ATF3P18847 181 aa24.53■■□□□ 1.52
USP48-205ENST00000421625 ATG9AQ7Z3C6 839 aa24.53■■□□□ 1.52
USP48-205ENST00000421625 HSP90AA4PQ58FG1 418 aa24.52■■□□□ 1.52
USP48-205ENST00000421625 OSBP2Q969R2 916 aa24.52■■□□□ 1.52
USP48-205ENST00000421625 ZNF496Q96IT1 587 aaPredicted RBP24.52■■□□□ 1.52
USP48-205ENST00000421625 INTS13Q9NVM9 706 aa24.52■■□□□ 1.52
USP48-205ENST00000421625 FANCLQ9NW38 375 aa24.52■■□□□ 1.52
USP48-205ENST00000421625 RAD51AP2Q09MP3 1159 aa24.52■■□□□ 1.52
USP48-205ENST00000421625 CHMP4CQ96CF2 233 aa24.52■■□□□ 1.52
USP48-205ENST00000421625 PRC1O43663 620 aa24.51■■□□□ 1.51
USP48-205ENST00000421625 ZC3H6P61129 1189 aaKnown RBP24.51■■□□□ 1.51
USP48-205ENST00000421625 AIFM3Q96NN9 605 aa24.51■■□□□ 1.51
USP48-205ENST00000421625 ZSCAN12O43309 604 aa24.51■■□□□ 1.51
USP48-205ENST00000421625 CASP7P55210 303 aa24.51■■□□□ 1.51
USP48-205ENST00000421625 GNL2Q13823 731 aaKnown RBP24.51■■□□□ 1.51
USP48-205ENST00000421625 SLC39A14Q15043 492 aa24.51■■□□□ 1.51
USP48-205ENST00000421625 NFATC2IPQ8NCF5 419 aa24.51■■□□□ 1.51
USP48-205ENST00000421625 CPLX1O14810 134 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 TPM1P09493 284 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 GNG11P61952 73 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 SHC4Q6S5L8 630 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 ARHGEF25Q86VW2 580 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 FBXL16Q8N461 479 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 AXIN2Q9Y2T1 843 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 FOXP2O15409 715 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 IFIT1P09914 478 aaKnown RBP24.5■■□□□ 1.51
USP48-205ENST00000421625 C1orf167Q5SNV9 1468 aa24.5■■□□□ 1.51
USP48-205ENST00000421625 CASQ1P31415 396 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 SMC1AQ14683 1233 aaKnown RBP24.49■■□□□ 1.51
USP48-205ENST00000421625 FCHSD1Q86WN1 690 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 ARHGAP6O43182 974 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 PPP2R3AQ06190 1150 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 MPHOSPH8Q99549 860 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 SLC52A2Q9HAB3 445 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 HPSEQ9Y251 543 aa24.49■■□□□ 1.51
USP48-205ENST00000421625 ATP8B1O43520 1251 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 ANTXR2P58335 489 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 MAP3K9P80192 1104 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 TOGARAM2Q6ZUX3 1019 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 CLIC6Q96NY7 704 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 PHRF1Q9P1Y6 1649 aaKnown RBP24.48■■□□□ 1.51
USP48-205ENST00000421625 NWD2Q9ULI1 1742 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 DHX16O60231 1041 aaKnown RBP24.48■■□□□ 1.51
USP48-205ENST00000421625 GYS2P54840 703 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 TXLNBQ8N3L3 684 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 FOXO4P98177 505 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 PDE4BQ07343 736 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 KRBA2Q6ZNG9 492 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 MB21D2Q8IYB1 491 aaPredicted RBP24.48■■□□□ 1.51
USP48-205ENST00000421625 GPR161Q8N6U8 529 aaKnown RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms