RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZGPATQ8N5A5 531 aaKnown RBP37.26■■■■□ 3.56
CSNK1E-206ENST00000413574 EPHX2P34913 555 aa37.25■■■■□ 3.55
CSNK1E-206ENST00000413574 RBM26Q5T8P6 1007 aaKnown RBP37.25■■■■□ 3.55
CSNK1E-206ENST00000413574 TAF1DQ9H5J8 278 aaPredicted RBP37.25■■■■□ 3.55
CSNK1E-206ENST00000413574 MAP4K4O95819 1239 aaPredicted RBP37.25■■■■□ 3.55
CSNK1E-206ENST00000413574 TBC1D10BQ4KMP7 808 aaPredicted RBP37.25■■■■□ 3.55
CSNK1E-206ENST00000413574 DOCK2Q92608 1830 aa37.24■■■■□ 3.55
CSNK1E-206ENST00000413574 ERC2O15083 957 aa37.24■■■■□ 3.55
CSNK1E-206ENST00000413574 TRPM4Q8TD43 1214 aa37.24■■■■□ 3.55
CSNK1E-206ENST00000413574 LRP2BPQ9P2M1 347 aa37.24■■■■□ 3.55
CSNK1E-206ENST00000413574 SUGT1Q9Y2Z0 365 aa37.24■■■■□ 3.55
CSNK1E-206ENST00000413574 PCDHAC2Q9Y5I4 1007 aa37.24■■■■□ 3.55
CSNK1E-206ENST00000413574 GLRX3O76003 335 aaKnown RBP37.23■■■■□ 3.55
CSNK1E-206ENST00000413574 ERICH6Q7L0X2 663 aa37.23■■■■□ 3.55
CSNK1E-206ENST00000413574 MYOZ2Q9NPC6 264 aa37.23■■■■□ 3.55
CSNK1E-206ENST00000413574 ADARB2Q9NS39 739 aaKnown RBP37.23■■■■□ 3.55
CSNK1E-206ENST00000413574 PAG1Q9NWQ8 432 aa37.23■■■■□ 3.55
CSNK1E-206ENST00000413574 HDAC9Q9UKV0 1011 aa37.23■■■■□ 3.55
CSNK1E-206ENST00000413574 RAI14Q9P0K7 980 aa37.22■■■■□ 3.55
CSNK1E-206ENST00000413574 SPTY2D1Q68D10 685 aaPredicted RBP37.21■■■■□ 3.55
CSNK1E-206ENST00000413574 MYH2Q9UKX2 1941 aa37.21■■■■□ 3.55
CSNK1E-206ENST00000413574 DIXDC1Q155Q3 683 aa37.21■■■■□ 3.55
CSNK1E-206ENST00000413574 ZNF384Q8TF68 577 aa37.21■■■■□ 3.55
CSNK1E-206ENST00000413574 HIRAP54198 1017 aaPredicted RBP37.2■■■■□ 3.55
CSNK1E-206ENST00000413574 MECOMQ03112 1051 aa37.2■■■■□ 3.55
CSNK1E-206ENST00000413574 IDH1O75874 414 aaKnown RBP37.19■■■■□ 3.54
CSNK1E-206ENST00000413574 EAPPQ56P03 285 aaPredicted RBP37.19■■■■□ 3.54
CSNK1E-206ENST00000413574 DZIP1Q86YF9 867 aaKnown RBP37.19■■■■□ 3.54
CSNK1E-206ENST00000413574 OSBPL3Q9H4L5 887 aa37.19■■■■□ 3.54
CSNK1E-206ENST00000413574 KIF4BQ2VIQ3 1234 aa37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 POTEIP0CG38 1075 aa37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 POTEJP0CG39 1038 aa37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 CRKP46108 304 aa37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 RBM5P52756 815 aaKnown RBP eCLIP37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 CFAP100Q494V2 611 aa37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 NSUN4Q96CB9 384 aaKnown RBP37.18■■■■□ 3.54
CSNK1E-206ENST00000413574 MAST2Q6P0Q8 1798 aa37.17■■■■□ 3.54
CSNK1E-206ENST00000413574 TTF1Q15361 905 aaPredicted RBP37.17■■■■□ 3.54
CSNK1E-206ENST00000413574 SERPINA10Q9UK55 444 aa37.17■■■■□ 3.54
CSNK1E-206ENST00000413574 MAST3O60307 1309 aa37.16■■■■□ 3.54
CSNK1E-206ENST00000413574 AOX1Q06278 1338 aa37.16■■■■□ 3.54
CSNK1E-206ENST00000413574 KIF3CO14782 793 aa37.16■■■■□ 3.54
CSNK1E-206ENST00000413574 NBPF9Q3BBW0 867 aa37.15■■■■□ 3.54
CSNK1E-206ENST00000413574 USP50Q70EL3 339 aaPredicted RBP37.15■■■■□ 3.54
CSNK1E-206ENST00000413574 DLGAP5Q15398 846 aa37.14■■■■□ 3.54
CSNK1E-206ENST00000413574 TEKT1Q969V4 418 aa37.14■■■■□ 3.54
CSNK1E-206ENST00000413574 MYH7P12883 1935 aa37.14■■■■□ 3.54
CSNK1E-206ENST00000413574 ASTN2O75129 1339 aaPredicted RBP37.14■■■■□ 3.54
CSNK1E-206ENST00000413574 MMP14P50281 582 aa37.14■■■■□ 3.54
CSNK1E-206ENST00000413574 PRMT6Q96LA8 375 aaPredicted RBP37.14■■■■□ 3.54
CSNK1E-206ENST00000413574 WNT10BO00744 389 aa37.13■■■■□ 3.53
CSNK1E-206ENST00000413574 HDLBPQ00341 1268 aaKnown RBP37.13■■■■□ 3.53
CSNK1E-206ENST00000413574 PNMA8AQ86V59 439 aaPredicted RBP37.13■■■■□ 3.53
CSNK1E-206ENST00000413574 GTF3C3Q9Y5Q9 886 aa37.13■■■■□ 3.53
CSNK1E-206ENST00000413574 ZBED3Q96IU2 234 aaPredicted RBP37.12■■■■□ 3.53
CSNK1E-206ENST00000413574 MRIQ9BWK5 157 aa37.12■■■■□ 3.53
CSNK1E-206ENST00000413574 DAGLAQ9Y4D2 1042 aa37.12■■■■□ 3.53
CSNK1E-206ENST00000413574 MAP3K12Q12852 859 aa37.11■■■■□ 3.53
CSNK1E-206ENST00000413574 HHIPL2Q6UWX4 724 aa37.11■■■■□ 3.53
CSNK1E-206ENST00000413574 SPDYE2BA6NHP3 402 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 CHGBP05060 677 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 SPDYE6P0CI01 402 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 NAA16Q6N069 864 aaPredicted RBP37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 MAGEB6Q8N7X4 407 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 MTMR14Q8NCE2 650 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 POLR2AP24928 1970 aaKnown RBP37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 ECM29Q5VYK3 1845 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 SLFNL1Q499Z3 407 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 ZDHHC15Q96MV8 337 aa37.1■■■■□ 3.53
CSNK1E-206ENST00000413574 RGS3P49796 1198 aa37.09■■■■□ 3.53
CSNK1E-206ENST00000413574 ADGRA1Q86SQ6 560 aa37.09■■■■□ 3.53
CSNK1E-206ENST00000413574 KBTBD3Q8NAB2 608 aa37.09■■■■□ 3.53
CSNK1E-206ENST00000413574 CLEC11AQ9Y240 323 aa37.09■■■■□ 3.53
CSNK1E-206ENST00000413574 SLC9C2Q5TAH2 1124 aa37.08■■■■□ 3.53
CSNK1E-206ENST00000413574 APOBEC3HQ6NTF7 200 aaKnown RBP37.08■■■■□ 3.53
CSNK1E-206ENST00000413574 AK9Q5TCS8 1911 aa37.07■■■■□ 3.53
CSNK1E-206ENST00000413574 GSTO1P78417 241 aa37.07■■■■□ 3.53
CSNK1E-206ENST00000413574 MROH7-TTC4A0A0A0MT08 1334 aa37.07■■■■□ 3.52
CSNK1E-206ENST00000413574 GAKO14976 1311 aa37.07■■■■□ 3.52
CSNK1E-206ENST00000413574 TRIM6-TRIM34B2RNG4 842 aa37.07■■■■□ 3.52
CSNK1E-206ENST00000413574 PDE6AP16499 860 aa37.07■■■■□ 3.52
CSNK1E-206ENST00000413574 TTC22Q5TAA0 569 aa37.07■■■■□ 3.52
CSNK1E-206ENST00000413574 GSPT1P15170 499 aaKnown RBP37.06■■■■□ 3.52
CSNK1E-206ENST00000413574 CYP7A1P22680 504 aa37.06■■■■□ 3.52
CSNK1E-206ENST00000413574 SLF2Q8IX21 1173 aa37.06■■■■□ 3.52
CSNK1E-206ENST00000413574 FAM163AQ96GL9 167 aaPredicted RBP37.06■■■■□ 3.52
CSNK1E-206ENST00000413574 TDRD3Q9H7E2 651 aaKnown RBP37.06■■■■□ 3.52
CSNK1E-206ENST00000413574 SCAF8Q9UPN6 1271 aaKnown RBP37.05■■■■□ 3.52
CSNK1E-206ENST00000413574 CLRN2A0PK11 232 aa37.04■■■■□ 3.52
CSNK1E-206ENST00000413574 RILPL2Q969X0 211 aa37.04■■■■□ 3.52
CSNK1E-206ENST00000413574 FSD1Q9BTV5 496 aa37.04■■■■□ 3.52
CSNK1E-206ENST00000413574 LDHCP07864 332 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 ANGEL2Q5VTE6 544 aaKnown RBP37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 LDHDQ86WU2 507 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 EVI5LQ96CN4 794 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 DDX24Q9GZR7 859 aaKnown RBP eCLIP37.03■■■■□ 3.523e-7■■■□□ 15.9
CSNK1E-206ENST00000413574 GGA3Q9NZ52 723 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 ZNF532Q9HCE3 1301 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 TCRBV5S4A2TA0A5A2 114 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 ADD2P35612 726 aa37.03■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms