RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 SLAIN1Q8ND83 568 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 CNKSR2Q8WXI2 1034 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 HOOK2Q96ED9 719 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 TEPSINQ96N21 525 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 WRNIP1Q96S55 665 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 PARK7Q99497 189 aaKnown RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 GDF15Q99988 308 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 TDRD3Q9H7E2 651 aaKnown RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 PHAXQ9H814 394 aaKnown RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 MTMR10Q9NXD2 777 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 CPA4Q9UI42 421 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 SERPINA10Q9UK55 444 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 TTF2Q9UNY4 1162 aaKnown RBP3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 MAP3K2Q9Y2U5 619 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 LAMB4A4D0S4 1761 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 ANKRD36CQ5JPF3 1778 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 BRCA2P51587 3418 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 COL6A3P12111 3177 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 SSC5DA1L4H1 1573 aa3.04□□□□□ -1.92
RNU4-53P-201ENST00000410828 AOX1Q06278 1338 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 ANKRD18BA2A2Z9 1011 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PI4KAP2A4QPH2 592 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TCP10L2B9ZVM9 353 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 H7C1W4 665 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PDHXO00330 501 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TAF5LO75529 589 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 IGKV5-2P06315 115 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 CSF1RP07333 972 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 CTGFP29279 349 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PRKCZQ05513 592 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 CALD1Q05682 793 aaKnown RBP3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PPIL2Q13356 520 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 MFSD14BQ5SR56 506 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 CCDC30Q5VVM6 783 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 DCAF15Q66K64 600 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 Q7L0L9 218 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 UBE3BQ7Z3V4 1068 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 NECAB2Q7Z6G3 386 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 CDAN1Q8IWY9 1227 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 DZIP1LQ8IYY4 767 aaKnown RBP3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TDHQ8IZJ6 230 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PI4KAP1Q8N8J0 262 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PXYLP1Q8TE99 480 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZKSCAN4Q969J2 545 aaPredicted RBP3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PAWRQ96IZ0 340 aaKnown RBP3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 DEFB118Q96PH6 123 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 PLA2G12BQ9BX93 195 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TMEM39BQ9GZU3 492 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 CRISPLD2Q9H0B8 497 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 UNC93B1Q9H1C4 597 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 MBIPQ9NS73 344 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TMOD2Q9NZR1 351 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 ZMYND8Q9ULU4 1186 aaPredicted RBP3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TRIM35Q9UPQ4 493 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 JAG2Q9Y219 1238 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 SNCAIPQ9Y6H5 919 aa3.03□□□□□ -1.92
RNU4-53P-201ENST00000410828 TAF1P21675 1872 aa3.03□□□□□ -1.93
RNU4-53P-201ENST00000410828 KDM3BQ7LBC6 1761 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 COL4A1P02462 1669 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM205AQ6ZU69 1335 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 RPTORQ8N122 1335 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 ADGRA2Q96PE1 1338 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 IRS2Q9Y4H2 1338 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 NEURL1BA8MQ27 555 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 SNAP23O00161 211 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 CXCL11O14625 94 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 TNPO2O14787 897 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 ADCY3O60266 1144 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 INHAP05111 366 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 ZNF853P0CG23 659 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 BCRP11274 1271 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 ELNP15502 786 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 HIBADHP31937 336 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 CRKP46108 304 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 FLT3LGP49771 235 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 BCAMP50895 628 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 CACNB3P54284 484 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 GNAI1P63096 354 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 HDLBPQ00341 1268 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 IFIT5Q13325 482 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 IRF5Q13568 498 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 GCKRQ14397 625 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 WDR43Q15061 677 aaKnown RBP eCLIP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 CWF19L2Q2TBE0 894 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 TAF7LQ5H9L4 462 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 FKBP1CQ5VVH2 108 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM109BQ6ICB4 259 aaPredicted RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 LDHAL6AQ6ZMR3 332 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 FASTKD5Q7L8L6 764 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 FAM83AQ86UY5 434 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 CCDC146Q8IYE0 955 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 C7orf61Q8IZ16 206 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 ANKLE1Q8NAG6 615 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 TDRD7Q8NHU6 1098 aaKnown RBP3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 TBC1D22AQ8WUA7 517 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 TEKT1Q969V4 418 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 COA7Q96BR5 231 aa3.02□□□□□ -1.93
RNU4-53P-201ENST00000410828 RUNDC1Q96C34 613 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms