RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 CTDNEP1O95476 244 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 ABL2P42684 1182 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 RFX5P48382 616 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 ZNF165P49910 485 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 GSDMDP57764 484 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 EXOSC10Q01780 885 aaKnown RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 KRT32Q14532 448 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 TUSC1Q2TAM9 212 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 MUM1L1Q5H9M0 696 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 DNTTIP2Q5QJE6 756 aaKnown RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 LARP1BQ659C4 914 aaKnown RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 E4F1Q66K89 784 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 FBXO38Q6PIJ6 1188 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 C11orf57Q6ZUT1 292 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 ELOA2Q8IYF1 753 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 FMR1NBQ8N0W7 255 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 CCDC112Q8NEF3 446 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 SLC4A5Q9BY07 1137 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 GOLPH3LQ9H4A5 285 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 CLIP2Q9UDT6 1046 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 RREB1Q92766 1687 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 BCORQ6W2J9 1755 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 OATP04181 439 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 ATP5JP18859 108 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 GTF2E1P29083 439 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 NCAPHQ15003 741 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 RABL6Q3YEC7 729 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 HDGFL1Q5TGJ6 251 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 NOL8Q76FK4 1167 aaKnown RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 FCHSD1Q86WN1 690 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 NECAB1Q8N987 351 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 SPATA32Q96LK8 384 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 ZNF215Q9UL58 517 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 HDAC5Q9UQL6 1122 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 CHD4Q14839 1912 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 NID2Q14112 1375 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 FANCGO15287 622 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 SLU7O95391 586 aaKnown RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 ZKSCAN1P17029 563 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 RFC5P40937 340 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 FGD1P98174 961 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 FAM160A1Q05DH4 1040 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 MYSM1Q5VVJ2 828 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 TRIM65Q6PJ69 517 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 KSR2Q6VAB6 950 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 IQUBQ8NA54 791 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 SPC24Q8NBT2 197 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 NSUN7Q8NE18 718 aaKnown RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 MARVELD3Q96A59 401 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 PBXIP1Q96AQ6 731 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 EAF2Q96CJ1 260 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 GPATCH3Q96I76 525 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 FAM227BQ96M60 508 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 DNAJC25Q9H1X3 360 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 COPRSQ9NQ92 184 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 RTEL1Q9NZ71 1219 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.68□□□□□ -1.82
CUL3-204ENST00000409777 CHPF2Q9P2E5 772 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 AKAP11Q9UKA4 1901 aa3.68□□□□□ -1.82
CUL3-204ENST00000409777 WDR19Q8NEZ3 1342 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 ATRNO75882 1429 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 ANKRD36CQ5JPF3 1778 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 IKBKBO14920 756 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 LTKP29376 864 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 PLA2G4AP47712 749 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 KCNA1Q09470 495 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 NAA30Q147X3 362 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 ARMCX5Q6P1M9 558 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 BLOC1S2Q6QNY1 142 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 ZNF589Q86UQ0 364 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 TMEM139Q8IV31 216 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 CLASRPQ8N2M8 674 aaKnown RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 CCDC150Q8NCX0 1101 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 LINS1Q8NG48 757 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 IP6K1Q92551 441 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 RNF166Q96A37 237 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 PPP1R13BQ96KQ4 1090 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 C16orf45Q96MC5 204 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 FAM217BQ9NTX9 383 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 CFAP45Q9UL16 551 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 ADGRG1Q9Y653 693 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 PI4KAP2A4QPH2 592 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 CCDC69A6NI79 296 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 MAP4K4O95819 1239 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 CASP7P55210 303 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 PSME1Q06323 249 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 TBX2Q13207 712 aaPredicted RBP3.67□□□□□ -1.82
CUL3-204ENST00000409777 ARID5BQ14865 1188 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 AKAP4Q5JQC9 854 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 NUTM2GQ5VZR2 741 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 STOX1Q6ZVD7 989 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 MPNDQ8N594 471 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 PI4KAP1Q8N8J0 262 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 PXYLP1Q8TE99 480 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 KHSRPQ92945 711 aaKnown RBP eCLIP3.67□□□□□ -1.822e-6■■■□□ 16.7
CUL3-204ENST00000409777 TIGD1Q96MW7 591 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 TRIM5Q9C035 493 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 ANO10Q9NW15 660 aa3.67□□□□□ -1.82
CUL3-204ENST00000409777 PSD3Q9NYI0 1048 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms