RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 CYP7A1P22680 504 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 DDIT3P35638 169 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 NUCB2P80303 420 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 NAA16Q6N069 864 aaPredicted RBP12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 DHX32Q7L7V1 743 aaKnown RBP12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 MTA3Q9BTC8 594 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 UPF3BQ9BZI7 483 aaKnown RBP12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 CD209Q9NNX6 404 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
SNORD88C-201ENST00000408061 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 PCP11498 1178 aaKnown RBP12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 TRDNQ13061 729 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 ADCK5Q3MIX3 580 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 ZNF622Q969S3 477 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 VPS33BQ9H267 617 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 CNNM2Q9H8M5 875 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 MAST2Q6P0Q8 1798 aa12.25□□□□□ -0.45
SNORD88C-201ENST00000408061 E7EWF7 191 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 AK2P54819 239 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 SOGA3Q5TF21 947 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 MSL1Q68DK7 614 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 PODNQ7Z5L7 613 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 TXNRD3Q86VQ6 643 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 FAM163AQ96GL9 167 aaPredicted RBP12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 AGXT2Q9BYV1 514 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 ATP8A2Q9NTI2 1148 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 POLLQ9UGP5 575 aa12.24□□□□□ -0.45
SNORD88C-201ENST00000408061 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 MBD4O95243 580 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 BAG3O95817 575 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 CHGBP05060 677 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 APPP05067 770 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 PLCG2P16885 1265 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 PPP4CP60510 307 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 TGFB2P61812 414 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 FKBP1AP62942 108 aaKnown RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 EXOSC10Q01780 885 aaKnown RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 NOL10Q9BSC4 688 aaKnown RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 CRNKL1Q9BZJ0 848 aaKnown RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 NAPBQ9H115 298 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 RNF41Q9H4P4 317 aaPredicted RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 IQSEC3Q9UPP2 1182 aaPredicted RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 DLEC1Q9Y238 1755 aa12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 COL11A2P13942 1736 aaPredicted RBP12.23□□□□□ -0.45
SNORD88C-201ENST00000408061 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 GSG1L2A8MUP6 293 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 FOXP2O15409 715 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 PTMSP20962 102 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 KLRK1P26718 216 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 POLD1P28340 1107 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 MCM5P33992 734 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 MECOMQ03112 1051 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 DZIP1Q86YF9 867 aaKnown RBP12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 RTKN2Q8IZC4 609 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 C7orf43Q8WVR3 580 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 RIOK1Q9BRS2 568 aaKnown RBP12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 MRIQ9BWK5 157 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 KRT23Q9C075 422 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 MTFR1LQ9H019 292 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 SLC4A4Q9Y6R1 1079 aa12.22□□□□□ -0.45
SNORD88C-201ENST00000408061 G3V3G9 751 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 EVCP57679 992 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 CHAF1AQ13111 956 aaPredicted RBP12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 SLFNL1Q499Z3 407 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 TTLL6Q8N841 843 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 TMEM87BQ96K49 555 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 ARMT1Q9H993 441 aa12.21□□□□□ -0.45
SNORD88C-201ENST00000408061 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
SNORD88C-201ENST00000408061 TDO2P48775 406 aa12.2□□□□□ -0.46
SNORD88C-201ENST00000408061 FGD1P98174 961 aa12.2□□□□□ -0.46
SNORD88C-201ENST00000408061 SBK1Q52WX2 424 aa12.2□□□□□ -0.46
SNORD88C-201ENST00000408061 CLEC17AQ6ZS10 378 aa12.2□□□□□ -0.46
SNORD88C-201ENST00000408061 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
SNORD88C-201ENST00000408061 SLX4Q8IY92 1834 aa12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 PDCP20941 246 aa12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 PRDX5P30044 214 aa12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 RAB3GAP1Q15042 981 aa12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 STOX1Q6ZVD7 989 aa12.19□□□□□ -0.46
SNORD88C-201ENST00000408061 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms