RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PDCL2Q8N4E4 241 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 AOPEPQ8N6M6 819 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 CCDC85AQ96PX6 553 aaPredicted RBP29.79■■■□□ 2.36
COL13A1-203ENST00000398969 POLR3EQ9NVU0 708 aa29.79■■■□□ 2.36
COL13A1-203ENST00000398969 ABCC12Q96J65 1359 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 NCOA7Q8NI08 942 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 KCNG4Q8TDN1 519 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 SYTL4Q96C24 671 aaPredicted RBP29.78■■■□□ 2.36
COL13A1-203ENST00000398969 SDF4Q9BRK5 362 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 ORC3Q9UBD5 711 aaPredicted RBP29.78■■■□□ 2.36
COL13A1-203ENST00000398969 YEATS4O95619 227 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 STARD3NLO95772 234 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 POLR3DP05423 398 aaPredicted RBP29.78■■■□□ 2.36
COL13A1-203ENST00000398969 DDB1Q16531 1140 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 PAXBP1Q9Y5B6 917 aa29.78■■■□□ 2.36
COL13A1-203ENST00000398969 TRIM28Q13263 835 aaKnown RBP29.77■■■□□ 2.36
COL13A1-203ENST00000398969 SF3A1Q15459 793 aaKnown RBP29.77■■■□□ 2.36
COL13A1-203ENST00000398969 PLA2G12BQ9BX93 195 aa29.77■■■□□ 2.36
COL13A1-203ENST00000398969 PCCAP05165 728 aaPredicted RBP29.76■■■□□ 2.36
COL13A1-203ENST00000398969 PI16Q6UXB8 463 aa29.76■■■□□ 2.36
COL13A1-203ENST00000398969 BRAPQ7Z569 592 aa29.76■■■□□ 2.36
COL13A1-203ENST00000398969 FAM89AQ96GI7 184 aa29.76■■■□□ 2.36
COL13A1-203ENST00000398969 SPATA31A5Q5VU36 1347 aa29.76■■■□□ 2.36
COL13A1-203ENST00000398969 SPATA31A7Q8IWB4 1347 aa29.76■■■□□ 2.36
COL13A1-203ENST00000398969 TAF7LQ5H9L4 462 aa29.76■■■□□ 2.35
COL13A1-203ENST00000398969 MYSM1Q5VVJ2 828 aa29.76■■■□□ 2.35
COL13A1-203ENST00000398969 RALYLQ86SE5 291 aaKnown RBP29.76■■■□□ 2.35
COL13A1-203ENST00000398969 SLIT2O94813 1529 aa29.76■■■□□ 2.35
COL13A1-203ENST00000398969 UBAP1LF5GYI3 381 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 GPAA1O43292 621 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 CSF1RP07333 972 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 RAB11FIP4Q86YS3 637 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 FBXW7Q969H0 707 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 ZNF330Q9Y3S2 320 aaPredicted RBP29.75■■■□□ 2.35
COL13A1-203ENST00000398969 NEDD4P46934 1319 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 ZNF213O14771 459 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 SPTLC2O15270 562 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 IFIT5Q13325 482 aaKnown RBP29.75■■■□□ 2.35
COL13A1-203ENST00000398969 SLC4A9Q96Q91 983 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 KIAA1468Q9P260 1216 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 WDR19Q8NEZ3 1342 aa29.75■■■□□ 2.35
COL13A1-203ENST00000398969 CCDC69A6NI79 296 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 CPLX1O14810 134 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 SKILP12757 684 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 FILIP1Q7Z7B0 1213 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 GJB4Q9NTQ9 266 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 RIC1Q4ADV7 1423 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 CCZ1BP86790 482 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 CCZ1P86791 482 aaPredicted RBP29.74■■■□□ 2.35
COL13A1-203ENST00000398969 NCBP1Q09161 790 aaKnown RBP29.74■■■□□ 2.35
COL13A1-203ENST00000398969 MYH7P12883 1935 aa29.74■■■□□ 2.35
COL13A1-203ENST00000398969 KIF28PB7ZC32 967 aa29.73■■■□□ 2.35
COL13A1-203ENST00000398969 SYCP1Q15431 976 aa29.73■■■□□ 2.35
COL13A1-203ENST00000398969 USP27XA6NNY8 438 aa29.73■■■□□ 2.35
COL13A1-203ENST00000398969 ZBTB38Q8NAP3 1195 aaPredicted RBP29.73■■■□□ 2.35
COL13A1-203ENST00000398969 ATP2B3Q16720 1220 aa29.72■■■□□ 2.35
COL13A1-203ENST00000398969 DPCR1Q3MIW9 517 aa29.72■■■□□ 2.35
COL13A1-203ENST00000398969 CEP135Q66GS9 1140 aa29.72■■■□□ 2.35
COL13A1-203ENST00000398969 CCDC112Q8NEF3 446 aa29.72■■■□□ 2.35
COL13A1-203ENST00000398969 C4AP0C0L4 1744 aa29.72■■■□□ 2.35
COL13A1-203ENST00000398969 C4BP0C0L5 1744 aa29.72■■■□□ 2.35
COL13A1-203ENST00000398969 KIF23Q02241 960 aaPredicted RBP29.71■■■□□ 2.35
COL13A1-203ENST00000398969 BPIFA3Q9BQP9 254 aa29.71■■■□□ 2.35
COL13A1-203ENST00000398969 DOT1LQ8TEK3 1739 aa29.71■■■□□ 2.35
COL13A1-203ENST00000398969 KIF6Q6ZMV9 814 aa29.71■■■□□ 2.35
COL13A1-203ENST00000398969 PKNOX2Q96KN3 472 aa29.71■■■□□ 2.35
COL13A1-203ENST00000398969 CYP19A1P11511 503 aaPredicted RBP29.7■■■□□ 2.35
COL13A1-203ENST00000398969 MCAMP43121 646 aa29.7■■■□□ 2.35
COL13A1-203ENST00000398969 SYNE3Q6ZMZ3 975 aa29.7■■■□□ 2.35
COL13A1-203ENST00000398969 BARGINQ6ZT62 677 aa29.7■■■□□ 2.35
COL13A1-203ENST00000398969 NBPF3Q9H094 633 aa29.7■■■□□ 2.35
COL13A1-203ENST00000398969 ANO1Q5XXA6 986 aa29.7■■■□□ 2.34
COL13A1-203ENST00000398969 NYAP1Q6ZVC0 841 aa29.7■■■□□ 2.34
COL13A1-203ENST00000398969 NBPF11Q86T75 865 aa29.7■■■□□ 2.34
COL13A1-203ENST00000398969 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.7■■■□□ 2.34
COL13A1-203ENST00000398969 ZRSR1Q15695 479 aaKnown RBP29.69■■■□□ 2.34
COL13A1-203ENST00000398969 AXDND1Q5T1B0 1012 aaPredicted RBP29.69■■■□□ 2.34
COL13A1-203ENST00000398969 RIPOR2Q9Y4F9 1068 aa29.69■■■□□ 2.34
COL13A1-203ENST00000398969 METTL24Q5JXM2 366 aa29.69■■■□□ 2.34
COL13A1-203ENST00000398969 MARCH10Q8NA82 808 aaPredicted RBP29.69■■■□□ 2.34
COL13A1-203ENST00000398969 ZNF202O95125 648 aa29.68■■■□□ 2.34
COL13A1-203ENST00000398969 ADD2P35612 726 aa29.68■■■□□ 2.34
COL13A1-203ENST00000398969 GSDMDP57764 484 aa29.68■■■□□ 2.34
COL13A1-203ENST00000398969 SLC3A2P08195 630 aaKnown RBP29.68■■■□□ 2.34
COL13A1-203ENST00000398969 CBX1P83916 185 aa29.68■■■□□ 2.34
COL13A1-203ENST00000398969 RGS22Q8NE09 1264 aa29.68■■■□□ 2.34
COL13A1-203ENST00000398969 OSBPL5Q9H0X9 879 aaPredicted RBP29.68■■■□□ 2.34
COL13A1-203ENST00000398969 AKAP11Q9UKA4 1901 aa29.67■■■□□ 2.34
COL13A1-203ENST00000398969 SYNE4Q8N205 404 aa29.67■■■□□ 2.34
COL13A1-203ENST00000398969 ZNF592Q92610 1267 aa29.67■■■□□ 2.34
COL13A1-203ENST00000398969 DENND2AQ9ULE3 1009 aa29.67■■■□□ 2.34
COL13A1-203ENST00000398969 ATRNO75882 1429 aa29.67■■■□□ 2.34
COL13A1-203ENST00000398969 CMA1P23946 247 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 PTPN14Q15678 1187 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 IMPACTQ9P2X3 320 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 ZMYM6O95789 1325 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 CDHR2Q9BYE9 1310 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 PFKFB1P16118 471 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 TRDNQ13061 729 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 TBC1D10CQ8IV04 446 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms