RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 TTC39AQ5SRH9 613 aa21.88■■□□□ 1.09
MBD1-208ENST00000398493 VPS37DQ86XT2 251 aa21.88■■□□□ 1.09
MBD1-208ENST00000398493 JAG2Q9Y219 1238 aa21.88■■□□□ 1.09
MBD1-208ENST00000398493 G3V3G9 751 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 MCMDC2Q4G0Z9 681 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 DCAF8Q5TAQ9 597 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 TDRD7Q8NHU6 1098 aaKnown RBP21.87■■□□□ 1.09
MBD1-208ENST00000398493 HMG20BQ9P0W2 317 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 ZNRF3Q9ULT6 936 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 GOLGA6L22H0YM25 854 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 FZD9O00144 591 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 SCARF1Q14162 830 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 CREB3L3Q68CJ9 461 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 PODNQ7Z5L7 613 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 CYP46A1Q9Y6A2 500 aa21.87■■□□□ 1.09
MBD1-208ENST00000398493 GOLIM4O00461 696 aa21.86■■□□□ 1.09
MBD1-208ENST00000398493 RAD17O75943 681 aa21.86■■□□□ 1.09
MBD1-208ENST00000398493 CASTP20810 708 aaKnown RBP21.86■■□□□ 1.09
MBD1-208ENST00000398493 HELLSQ9NRZ9 838 aa21.86■■□□□ 1.09
MBD1-208ENST00000398493 PI16Q6UXB8 463 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 CLEC17AQ6ZS10 378 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 ARAP2Q8WZ64 1704 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 JAKMIP1Q96N16 626 aaKnown RBP21.85■■□□□ 1.09
MBD1-208ENST00000398493 CHD4Q14839 1912 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 ZNF541Q9H0D2 1346 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 CXCL9Q07325 125 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 RASGRF1Q13972 1273 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 VPS53Q5VIR6 699 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 ZGPATQ8N5A5 531 aaKnown RBP21.85■■□□□ 1.09
MBD1-208ENST00000398493 TTC14Q96N46 770 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 ZSWIM6Q9HCJ5 1215 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 LIMCH1Q9UPQ0 1083 aa21.85■■□□□ 1.09
MBD1-208ENST00000398493 COL1A1P02452 1464 aaPredicted RBP21.84■■□□□ 1.09
MBD1-208ENST00000398493 SLC27A2O14975 620 aa21.84■■□□□ 1.09
MBD1-208ENST00000398493 NOL8Q76FK4 1167 aaKnown RBP21.84■■□□□ 1.09
MBD1-208ENST00000398493 MXD3Q9BW11 206 aa21.84■■□□□ 1.09
MBD1-208ENST00000398493 PDRG1Q9NUG6 133 aa21.84■■□□□ 1.09
MBD1-208ENST00000398493 NDUFB9Q9Y6M9 179 aa21.84■■□□□ 1.09
MBD1-208ENST00000398493 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
MBD1-208ENST00000398493 SCN9AQ15858 1988 aa21.84■■□□□ 1.09
MBD1-208ENST00000398493 ARID4AP29374 1257 aaPredicted RBP21.83■■□□□ 1.09
MBD1-208ENST00000398493 MCAMP43121 646 aa21.83■■□□□ 1.09
MBD1-208ENST00000398493 GTF2IP78347 998 aa21.83■■□□□ 1.09
MBD1-208ENST00000398493 KRT32Q14532 448 aa21.83■■□□□ 1.09
MBD1-208ENST00000398493 ZSCAN31Q96LW9 406 aaPredicted RBP21.83■■□□□ 1.09
MBD1-208ENST00000398493 SKOR2Q2VWA4 1001 aaPredicted RBP21.83■■□□□ 1.08
MBD1-208ENST00000398493 TSGA10IPQ3SY00 556 aa21.83■■□□□ 1.08
MBD1-208ENST00000398493 RUFY3Q7L099 469 aa21.83■■□□□ 1.08
MBD1-208ENST00000398493 PSMD14O00487 310 aa21.82■■□□□ 1.08
MBD1-208ENST00000398493 AK2P54819 239 aa21.82■■□□□ 1.08
MBD1-208ENST00000398493 CHAF1AQ13111 956 aaPredicted RBP21.82■■□□□ 1.08
MBD1-208ENST00000398493 TTLL5Q6EMB2 1281 aa21.82■■□□□ 1.08
MBD1-208ENST00000398493 ZNF589Q86UQ0 364 aaPredicted RBP21.82■■□□□ 1.08
MBD1-208ENST00000398493 FBXW7Q969H0 707 aa21.82■■□□□ 1.08
MBD1-208ENST00000398493 GNL3LQ9NVN8 582 aaKnown RBP21.82■■□□□ 1.08
MBD1-208ENST00000398493 DICER1Q9UPY3 1922 aaKnown RBP21.81■■□□□ 1.08
MBD1-208ENST00000398493 RNF113AO15541 343 aaKnown RBP21.81■■□□□ 1.08
MBD1-208ENST00000398493 TRAK2O60296 914 aa21.81■■□□□ 1.08
MBD1-208ENST00000398493 CYP2E1P05181 493 aaPredicted RBP21.81■■□□□ 1.08
MBD1-208ENST00000398493 ZFYP08048 801 aaPredicted RBP21.81■■□□□ 1.08
MBD1-208ENST00000398493 ZNF512BQ96KM6 892 aaPredicted RBP21.81■■□□□ 1.08
MBD1-208ENST00000398493 ZBTB12Q9Y330 459 aaPredicted RBP21.8■■□□□ 1.08
MBD1-208ENST00000398493 USP17L3A6NCW0 530 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 USP17L4A6NCW7 530 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 EIF6P56537 245 aaKnown RBP21.8■■□□□ 1.08
MBD1-208ENST00000398493 ANKRD1Q15327 319 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 ZMYM1Q5SVZ6 1142 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 DACT2Q5SW24 774 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 CIAPIN1Q6FI81 312 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 USP17L1Q7RTZ2 530 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 CERS5Q8N5B7 392 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 SPATA5Q8NB90 893 aa21.8■■□□□ 1.08
MBD1-208ENST00000398493 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.8■■□□□ 1.08
MBD1-208ENST00000398493 UQCRFS1P1P0C7P4 283 aa21.79■■□□□ 1.08
MBD1-208ENST00000398493 GRIK5Q16478 980 aa21.79■■□□□ 1.08
MBD1-208ENST00000398493 ADCK5Q3MIX3 580 aa21.79■■□□□ 1.08
MBD1-208ENST00000398493 STRIP1Q5VSL9 837 aa21.79■■□□□ 1.08
MBD1-208ENST00000398493 BLOC1S2Q6QNY1 142 aa21.79■■□□□ 1.08
MBD1-208ENST00000398493 SH2B1Q9NRF2 756 aaPredicted RBP21.79■■□□□ 1.08
MBD1-208ENST00000398493 FAM205AQ6ZU69 1335 aa21.79■■□□□ 1.08
MBD1-208ENST00000398493 DDNO94850 711 aaPredicted RBP21.78■■□□□ 1.08
MBD1-208ENST00000398493 VIL1P09327 827 aaKnown RBP21.78■■□□□ 1.08
MBD1-208ENST00000398493 ZAP70P43403 619 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 DENND2AQ9ULE3 1009 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 GJA3Q9Y6H8 435 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 SEMA3EO15041 775 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 ZBTB22O15209 634 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 BAG4O95429 457 aaKnown RBP21.78■■□□□ 1.08
MBD1-208ENST00000398493 DSCC1Q9BVC3 393 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 ALDH8A1Q9H2A2 487 aaPredicted RBP21.78■■□□□ 1.08
MBD1-208ENST00000398493 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
MBD1-208ENST00000398493 TTF1Q15361 905 aaPredicted RBP21.76■■□□□ 1.07
MBD1-208ENST00000398493 ZSCAN25Q6NSZ9 544 aa21.76■■□□□ 1.07
MBD1-208ENST00000398493 SEC62Q99442 399 aaKnown RBP21.76■■□□□ 1.07
MBD1-208ENST00000398493 RPAP1Q9BWH6 1393 aaPredicted RBP21.76■■□□□ 1.07
MBD1-208ENST00000398493 MFSD14BQ5SR56 506 aa21.76■■□□□ 1.07
MBD1-208ENST00000398493 RSBN1LQ6PCB5 846 aaPredicted RBP21.76■■□□□ 1.07
MBD1-208ENST00000398493 CCDC129Q6ZRS4 1044 aa21.76■■□□□ 1.07
MBD1-208ENST00000398493 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.76■■□□□ 1.076e-7■■■■□ 23.3
MBD1-208ENST00000398493 CPA1P15085 419 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms