RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 NSUN4Q96CB9 384 aaKnown RBP28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 FAM227BQ96M60 508 aa28.35■■■□□ 2.13
TSPAN4-202ENST00000397396 PSME4Q14997 1843 aa28.34■■■□□ 2.13
TSPAN4-202ENST00000397396 CHD4Q14839 1912 aa28.34■■■□□ 2.13
TSPAN4-202ENST00000397396 LDHCP07864 332 aa28.34■■■□□ 2.13
TSPAN4-202ENST00000397396 TCRBV5S4A2TA0A5A2 114 aa28.33■■■□□ 2.13
TSPAN4-202ENST00000397396 YDJCA8MPS7 323 aa28.33■■■□□ 2.13
TSPAN4-202ENST00000397396 YBX3P16989 372 aaKnown RBP eCLIP28.33■■■□□ 2.13
TSPAN4-202ENST00000397396 MECOMQ03112 1051 aa28.33■■■□□ 2.13
TSPAN4-202ENST00000397396 GPR162Q16538 588 aa28.33■■■□□ 2.13
TSPAN4-202ENST00000397396 DACT2Q5SW24 774 aa28.33■■■□□ 2.13
TSPAN4-202ENST00000397396 CYP7A1P22680 504 aa28.32■■■□□ 2.12
TSPAN4-202ENST00000397396 CERS3Q8IU89 383 aa28.32■■■□□ 2.12
TSPAN4-202ENST00000397396 COL4A5P29400 1685 aa28.32■■■□□ 2.12
TSPAN4-202ENST00000397396 CCDC171Q6TFL3 1326 aa28.32■■■□□ 2.12
TSPAN4-202ENST00000397396 MYO5AQ9Y4I1 1855 aaKnown RBP28.31■■■□□ 2.12
TSPAN4-202ENST00000397396 EIF6P56537 245 aaKnown RBP28.31■■■□□ 2.12
TSPAN4-202ENST00000397396 TNIP1Q15025 636 aa28.31■■■□□ 2.12
TSPAN4-202ENST00000397396 SCN9AQ15858 1988 aa28.3■■■□□ 2.12
TSPAN4-202ENST00000397396 CIAPIN1Q6FI81 312 aa28.3■■■□□ 2.12
TSPAN4-202ENST00000397396 OSBP2Q969R2 916 aa28.3■■■□□ 2.12
TSPAN4-202ENST00000397396 AIDAQ96BJ3 306 aa28.3■■■□□ 2.12
TSPAN4-202ENST00000397396 ANO2Q9NQ90 1003 aa28.3■■■□□ 2.12
TSPAN4-202ENST00000397396 VIL1P09327 827 aaKnown RBP28.29■■■□□ 2.12
TSPAN4-202ENST00000397396 RSBN1LQ6PCB5 846 aaPredicted RBP28.29■■■□□ 2.12
TSPAN4-202ENST00000397396 NOL10Q9BSC4 688 aaKnown RBP28.29■■■□□ 2.12
TSPAN4-202ENST00000397396 MMP14P50281 582 aa28.28■■■□□ 2.12
TSPAN4-202ENST00000397396 ZNF646O15015 1829 aaPredicted RBP28.28■■■□□ 2.12
TSPAN4-202ENST00000397396 FZD9O00144 591 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 GNAT2P19087 354 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 HDLBPQ00341 1268 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 CERS5Q8N5B7 392 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 AGBL3Q8NEM8 1001 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 FAM163AQ96GL9 167 aaPredicted RBP28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 MRIQ9BWK5 157 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 PUS7LQ9H0K6 701 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 KCNQ5Q9NR82 932 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 TTF2Q9UNY4 1162 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 MROH7-TTC4A0A0A0MT08 1334 aa28.27■■■□□ 2.12
TSPAN4-202ENST00000397396 PSMD14O00487 310 aa28.26■■■□□ 2.11
TSPAN4-202ENST00000397396 GPAA1O43292 621 aa28.26■■■□□ 2.11
TSPAN4-202ENST00000397396 RAD17O75943 681 aa28.26■■■□□ 2.11
TSPAN4-202ENST00000397396 BAG3O95817 575 aa28.26■■■□□ 2.11
TSPAN4-202ENST00000397396 DICER1Q9UPY3 1922 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-202ENST00000397396 MAGEB6P1A0A0J9YX57 407 aa28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 M0R2C6 588 aa28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 SEC24BO95487 1268 aa28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 CHGBP05060 677 aa28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 MCCP23508 829 aa28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 RPS12P25398 132 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 ZNF589Q86UQ0 364 aaPredicted RBP28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 SEC62Q99442 399 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 IL25Q9H293 177 aa28.25■■■□□ 2.11
TSPAN4-202ENST00000397396 CXCL9Q07325 125 aa28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 HHIPL2Q6UWX4 724 aa28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 ZNF384Q8TF68 577 aa28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 DSCC1Q9BVC3 393 aa28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 HDAC9Q9UKV0 1011 aa28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 GAKO14976 1311 aa28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 RPAP1Q9BWH6 1393 aaPredicted RBP28.24■■■□□ 2.11
TSPAN4-202ENST00000397396 MBD4O95243 580 aa28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 PLCG2P16885 1265 aa28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 PRELPP51888 382 aa28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 GRIK5Q16478 980 aa28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 SLFNL1Q499Z3 407 aa28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 TEKT1Q969V4 418 aa28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 LSG1Q9H089 658 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-202ENST00000397396 KIAA0825Q8IV33 1275 aa28.22■■■□□ 2.11
TSPAN4-202ENST00000397396 RNF181Q9P0P0 153 aa28.22■■■□□ 2.11
TSPAN4-202ENST00000397396 SERPINA10Q9UK55 444 aa28.22■■■□□ 2.11
TSPAN4-202ENST00000397396 SBF1O95248 1867 aa28.22■■■□□ 2.11
TSPAN4-202ENST00000397396 ZC3H4Q9UPT8 1303 aaKnown RBP28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 F8W031 263 aaPredicted RBP28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 DIXDC1Q155Q3 683 aa28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 CCDC129Q6ZRS4 1044 aa28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 OGFOD1Q8N543 542 aa28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 MIGA1Q8NAN2 632 aa28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 STRBPQ96SI9 672 aaKnown RBP28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 MXD3Q9BW11 206 aa28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 USP26Q9BXU7 913 aa28.21■■■□□ 2.11
TSPAN4-202ENST00000397396 PPP4CP60510 307 aa28.2■■■□□ 2.11
TSPAN4-202ENST00000397396 ADGRA1Q86SQ6 560 aa28.2■■■□□ 2.11
TSPAN4-202ENST00000397396 GMLQ99445 158 aa28.2■■■□□ 2.11
TSPAN4-202ENST00000397396 RIOK1Q9BRS2 568 aaKnown RBP28.2■■■□□ 2.11
TSPAN4-202ENST00000397396 U3KPZ7 1027 aaPredicted RBP28.2■■■□□ 2.11
TSPAN4-202ENST00000397396 MYH2Q9UKX2 1941 aa28.2■■■□□ 2.1
TSPAN4-202ENST00000397396 GPR75-ASB3A0A0A6YYF3 556 aa28.19■■■□□ 2.1
TSPAN4-202ENST00000397396 DCAF8L1A6NGE4 600 aa28.19■■■□□ 2.1
TSPAN4-202ENST00000397396 C22orf23Q9BZE7 217 aa28.19■■■□□ 2.1
TSPAN4-202ENST00000397396 CRNKL1Q9BZJ0 848 aaKnown RBP28.19■■■□□ 2.1
TSPAN4-202ENST00000397396 NACAP1Q9BZK3 213 aa28.19■■■□□ 2.1
TSPAN4-202ENST00000397396 HSPD1P10809 573 aaKnown RBP28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 LCORLQ8N3X6 602 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 MAP4K1Q92918 833 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 ARMT1Q9H993 441 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 AATFQ9NY61 560 aaKnown RBP eCLIP28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 CTNNA3Q9UI47 895 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 DAGLAQ9Y4D2 1042 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 TIAM2Q8IVF5 1701 aa28.18■■■□□ 2.1
TSPAN4-202ENST00000397396 ZMYM6O95789 1325 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms