RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 DEFB129Q9H1M3 183 aa21.62■■□□□ 1.05
UPK3A-202ENST00000396082 DENND2AQ9ULE3 1009 aa21.62■■□□□ 1.05
UPK3A-202ENST00000396082 SUGT1Q9Y2Z0 365 aa21.62■■□□□ 1.05
UPK3A-202ENST00000396082 SEMA3EO15041 775 aa21.61■■□□□ 1.05
UPK3A-202ENST00000396082 SURF6O75683 361 aaKnown RBP21.61■■□□□ 1.05
UPK3A-202ENST00000396082 MAP2K2P36507 400 aa21.61■■□□□ 1.05
UPK3A-202ENST00000396082 MVPQ14764 893 aaKnown RBP21.61■■□□□ 1.05
UPK3A-202ENST00000396082 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
UPK3A-202ENST00000396082 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.61■■□□□ 1.05
UPK3A-202ENST00000396082 SSH3Q8TE77 659 aa21.61■■□□□ 1.05
UPK3A-202ENST00000396082 XAGE2Q96GT9 111 aa21.61■■□□□ 1.05
UPK3A-202ENST00000396082 AOX1Q06278 1338 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 HDLBPQ00341 1268 aaKnown RBP21.6■■□□□ 1.05
UPK3A-202ENST00000396082 NOGQ13253 232 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 TNFAIP1Q13829 316 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 CCDC102AQ96A19 550 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 TDRD3Q9H7E2 651 aaKnown RBP21.6■■□□□ 1.05
UPK3A-202ENST00000396082 WBP1LQ9NX94 342 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 DDX19BQ9UMR2 479 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 COG6Q9Y2V7 657 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 PPP2R3BQ9Y5P8 575 aa21.6■■□□□ 1.05
UPK3A-202ENST00000396082 FOXN1O15353 648 aa21.59■■□□□ 1.05
UPK3A-202ENST00000396082 PRKG1Q13976 671 aa21.59■■□□□ 1.05
UPK3A-202ENST00000396082 SPDYE2Q495Y8 402 aa21.59■■□□□ 1.05
UPK3A-202ENST00000396082 MOB2Q70IA6 237 aa21.59■■□□□ 1.05
UPK3A-202ENST00000396082 ZNF70Q9UC06 446 aaPredicted RBP21.59■■□□□ 1.05
UPK3A-202ENST00000396082 CEP85Q6P2H3 762 aa21.58■■□□□ 1.05
UPK3A-202ENST00000396082 ARMC9Q7Z3E5 817 aa21.58■■□□□ 1.05
UPK3A-202ENST00000396082 YTHDC1Q96MU7 727 aaKnown RBP21.58■■□□□ 1.05
UPK3A-202ENST00000396082 TMOD2Q9NZR1 351 aa21.58■■□□□ 1.05
UPK3A-202ENST00000396082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.58■■□□□ 1.05
UPK3A-202ENST00000396082 UBE2Q2LH0YL09 131 aa21.57■■□□□ 1.04
UPK3A-202ENST00000396082 LDHBP07195 334 aaKnown RBP21.57■■□□□ 1.04
UPK3A-202ENST00000396082 TNNI2P48788 182 aa21.57■■□□□ 1.04
UPK3A-202ENST00000396082 CTCFP49711 727 aaPredicted RBP21.57■■□□□ 1.04
UPK3A-202ENST00000396082 ZGPATQ8N5A5 531 aaKnown RBP21.57■■□□□ 1.04
UPK3A-202ENST00000396082 CHMP4BQ9H444 224 aaKnown RBP21.57■■□□□ 1.04
UPK3A-202ENST00000396082 TCP10L2B9ZVM9 353 aa21.56■■□□□ 1.04
UPK3A-202ENST00000396082 PRDX5P30044 214 aa21.56■■□□□ 1.04
UPK3A-202ENST00000396082 RASGRF1Q13972 1273 aa21.56■■□□□ 1.04
UPK3A-202ENST00000396082 RASA3Q14644 834 aa21.56■■□□□ 1.04
UPK3A-202ENST00000396082 SUPT20HL1Q3ZLR7 823 aa21.56■■□□□ 1.04
UPK3A-202ENST00000396082 ZDHHC15Q96MV8 337 aa21.56■■□□□ 1.04
UPK3A-202ENST00000396082 SALL1Q9NSC2 1324 aa21.55■■□□□ 1.04
UPK3A-202ENST00000396082 FAM155AB1AL88 458 aaPredicted RBP21.55■■□□□ 1.04
UPK3A-202ENST00000396082 SLC10A3P09131 477 aa21.55■■□□□ 1.04
UPK3A-202ENST00000396082 HHIPL2Q6UWX4 724 aa21.55■■□□□ 1.04
UPK3A-202ENST00000396082 MRIQ9BWK5 157 aa21.55■■□□□ 1.04
UPK3A-202ENST00000396082 ANGEL1Q9UNK9 670 aaKnown RBP21.55■■□□□ 1.04
UPK3A-202ENST00000396082 PPP1R12BO60237 982 aaPredicted RBP21.54■■□□□ 1.04
UPK3A-202ENST00000396082 TNNI3KQ59H18 835 aa21.54■■□□□ 1.04
UPK3A-202ENST00000396082 RASAL3Q86YV0 1011 aa21.54■■□□□ 1.04
UPK3A-202ENST00000396082 ABCF2Q9UG63 623 aa21.54■■□□□ 1.04
UPK3A-202ENST00000396082 FPGT-TNNI3KV9GXZ4 949 aa21.54■■□□□ 1.04
UPK3A-202ENST00000396082 PCNTO95613 3336 aa21.54■■□□□ 1.04
UPK3A-202ENST00000396082 PDS5AQ29RF7 1337 aaKnown RBP21.54■■□□□ 1.04
UPK3A-202ENST00000396082 ZBTB22O15209 634 aa21.53■■□□□ 1.04
UPK3A-202ENST00000396082 DIXDC1Q155Q3 683 aa21.53■■□□□ 1.04
UPK3A-202ENST00000396082 NBPF12Q5TAG4 269 aaPredicted RBP21.53■■□□□ 1.04
UPK3A-202ENST00000396082 DZIP1Q86YF9 867 aaKnown RBP21.53■■□□□ 1.04
UPK3A-202ENST00000396082 ZIC5Q96T25 663 aa21.53■■□□□ 1.04
UPK3A-202ENST00000396082 GPR108Q9NPR9 543 aa21.53■■□□□ 1.04
UPK3A-202ENST00000396082 NOP58Q9Y2X3 529 aaKnown RBP21.53■■□□□ 1.04
UPK3A-202ENST00000396082 HMMRO75330 724 aa21.52■■□□□ 1.04
UPK3A-202ENST00000396082 CACNB3P54284 484 aa21.52■■□□□ 1.04
UPK3A-202ENST00000396082 KIF23Q02241 960 aaPredicted RBP21.52■■□□□ 1.04
UPK3A-202ENST00000396082 PDE3AQ14432 1141 aa21.52■■□□□ 1.04
UPK3A-202ENST00000396082 COL13A1Q5TAT6 717 aaPredicted RBP21.52■■□□□ 1.04
UPK3A-202ENST00000396082 SPTY2D1Q68D10 685 aaPredicted RBP21.52■■□□□ 1.04
UPK3A-202ENST00000396082 APOBEC3HQ6NTF7 200 aaKnown RBP21.52■■□□□ 1.04
UPK3A-202ENST00000396082 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.04
UPK3A-202ENST00000396082 FZD1Q9UP38 647 aa21.52■■□□□ 1.04
UPK3A-202ENST00000396082 UQCRFS1P1P0C7P4 283 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 LBX1P52954 281 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 CCDC158Q5M9N0 1113 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 TTC39AQ5SRH9 613 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 ERC1Q8IUD2 1116 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 ZBTB40Q9NUA8 1239 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 DAGLAQ9Y4D2 1042 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 SSC5DA1L4H1 1573 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 MYH2Q9UKX2 1941 aa21.51■■□□□ 1.03
UPK3A-202ENST00000396082 CA12O43570 354 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 HSPA8P11142 646 aaKnown RBP21.5■■□□□ 1.03
UPK3A-202ENST00000396082 ARID4AP29374 1257 aaPredicted RBP21.5■■□□□ 1.03
UPK3A-202ENST00000396082 HSP90AB4PQ58FF6 505 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 C20orf194Q5TEA3 1177 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 SLF2Q8IX21 1173 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 RPAP2Q8IXW5 612 aaPredicted RBP21.5■■□□□ 1.03
UPK3A-202ENST00000396082 SPATA5Q8NB90 893 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 DBNDD2Q9BQY9 259 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 TMEM39BQ9GZU3 492 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 HMG20BQ9P0W2 317 aa21.5■■□□□ 1.03
UPK3A-202ENST00000396082 IREB2P48200 963 aaKnown RBP21.49■■□□□ 1.03
UPK3A-202ENST00000396082 PI16Q6UXB8 463 aa21.48■■□□□ 1.03
UPK3A-202ENST00000396082 PRDM10Q9NQV6 1147 aa21.48■■□□□ 1.03
UPK3A-202ENST00000396082 TSKSQ9UJT2 592 aa21.48■■□□□ 1.03
UPK3A-202ENST00000396082 AKAP11Q9UKA4 1901 aa21.47■■□□□ 1.03
UPK3A-202ENST00000396082 MCAMP43121 646 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms