RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 NLRP5P59047 1200 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 KANK3Q6NY19 840 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 KIF18AQ8NI77 898 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 NRXN3Q9Y4C0 1643 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 ELP1O95163 1332 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 PTGS1P23219 599 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 PDIA3P30101 505 aaKnown RBP7.56□□□□□ -1.2
BDNF-203ENST00000395978 KIF5BP33176 963 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 SCRN1Q12765 414 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 STIM1Q13586 685 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 RABL6Q3YEC7 729 aaPredicted RBP7.56□□□□□ -1.2
BDNF-203ENST00000395978 IFIT1BQ5T764 474 aaKnown RBP7.56□□□□□ -1.2
BDNF-203ENST00000395978 ANO1Q5XXA6 986 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 TMC6Q7Z403 805 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 IL25Q9H293 177 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 GREM2Q9H772 168 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 ARMT1Q9H993 441 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 CBX8Q9HC52 389 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 MAST3O60307 1309 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 NBPF26B4DH59 902 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 PDE8BO95263 885 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 PDIA6Q15084 440 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 NBPF14Q5TI25 921 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 KLHL10Q6JEL2 608 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 NBPF10Q6P3W6 841 aaKnown RBP7.55□□□□□ -1.2
BDNF-203ENST00000395978 TPTE2Q6XPS3 522 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 NBPF15Q8N660 670 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 PIGBQ92521 554 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 PDCL3Q9H2J4 239 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 TRMT1Q9NXH9 659 aaKnown RBP7.55□□□□□ -1.2
BDNF-203ENST00000395978 MAGEC2Q9UBF1 373 aaPredicted RBP7.55□□□□□ -1.2
BDNF-203ENST00000395978 ZBTB1Q9Y2K1 713 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 LMTK3Q96Q04 1460 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 BAG3O95817 575 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 SKILP12757 684 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 PDE6AP16499 860 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 USP28Q96RU2 1077 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 TNS3Q68CZ2 1445 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 TOM1O60784 492 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 BMP15O95972 392 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 IL6STP40189 918 aaPredicted RBP7.55□□□□□ -1.2
BDNF-203ENST00000395978 NLRP10Q86W26 655 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 OSBP2Q969R2 916 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 NYXQ9GZU5 481 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 UTYO14607 1347 aa7.55□□□□□ -1.2
BDNF-203ENST00000395978 NR1I2O75469 434 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 YEATS4O95619 227 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 RFC4P35249 363 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 UBE3CQ15386 1083 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 CCDC194A0A1B0GVG4 234 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 TRIM75PA6NK02 468 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 PATL2C9JE40 543 aaKnown RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 ZNF500O60304 480 aaPredicted RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 ATP2B2Q01814 1243 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 FAM177A1Q8N128 213 aaPredicted RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 PDCL2Q8N4E4 241 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 NSUN7Q8NE18 718 aaKnown RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 ZKSCAN3Q9BRR0 538 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 ZSCAN12O43309 604 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 LMOD1P29536 600 aaPredicted RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 PHKA1P46020 1223 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 TOB2Q14106 344 aaPredicted RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 MYSM1Q5VVJ2 828 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 KRT40Q6A162 431 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
BDNF-203ENST00000395978 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
BDNF-203ENST00000395978 CALM1P0DP23 149 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 CALM2P0DP24 149 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 CALM3P0DP25 149 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 UBASH3AP57075 661 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 TSGA10IPQ3SY00 556 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 ADALQ6DHV7 355 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 KRI1Q8N9T8 703 aaKnown RBP7.53□□□□□ -1.2
BDNF-203ENST00000395978 FBXO18Q8NFZ0 1043 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.53□□□□□ -1.2
BDNF-203ENST00000395978 KAZALD1Q96I82 304 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 ADD1P35611 737 aaKnown RBP7.53□□□□□ -1.2
BDNF-203ENST00000395978 FOXO4P98177 505 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 GPS2Q13227 327 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 TRIM28Q13263 835 aaKnown RBP7.53□□□□□ -1.2
BDNF-203ENST00000395978 AKNAD1Q5T1N1 836 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 TTLL11Q8NHH1 800 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 PHKBQ93100 1093 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 AK7Q96M32 723 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 ANKRD2Q9GZV1 360 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 PAXBP1Q9Y5B6 917 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 RTL9Q8NET4 1388 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 M0R2C6 588 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 HMGB2P26583 209 aaKnown RBP7.53□□□□□ -1.2
BDNF-203ENST00000395978 ZNF75DP51815 510 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 TERF1P54274 439 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 RILPL1Q5EBL4 403 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms