RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 TCRBV5S4A2TA0A5A2 114 aa29.34■■■□□ 2.29
CTF1-202ENST00000395019 AOC3Q16853 763 aa29.34■■■□□ 2.29
CTF1-202ENST00000395019 C15orf52Q6ZUT6 534 aaKnown RBP29.34■■■□□ 2.29
CTF1-202ENST00000395019 PUS7LQ9H0K6 701 aaKnown RBP29.34■■■□□ 2.29
CTF1-202ENST00000395019 SCN9AQ15858 1988 aa29.34■■■□□ 2.29
CTF1-202ENST00000395019 HSPD1P10809 573 aaKnown RBP29.34■■■□□ 2.29
CTF1-202ENST00000395019 GRIPAP1Q4V328 841 aa29.34■■■□□ 2.29
CTF1-202ENST00000395019 IQSEC3Q9UPP2 1182 aaPredicted RBP29.34■■■□□ 2.29
CTF1-202ENST00000395019 DICER1Q9UPY3 1922 aaKnown RBP29.34■■■□□ 2.29
CTF1-202ENST00000395019 MYO5AQ9Y4I1 1855 aaKnown RBP29.33■■■□□ 2.29
CTF1-202ENST00000395019 COL1A1P02452 1464 aaPredicted RBP29.33■■■□□ 2.29
CTF1-202ENST00000395019 ZNF532Q9HCE3 1301 aa29.33■■■□□ 2.29
CTF1-202ENST00000395019 VPS53Q5VIR6 699 aa29.33■■■□□ 2.29
CTF1-202ENST00000395019 UPF3BQ9BZI7 483 aaKnown RBP29.33■■■□□ 2.29
CTF1-202ENST00000395019 ZNF646O15015 1829 aaPredicted RBP29.32■■■□□ 2.28
CTF1-202ENST00000395019 LTBP3Q9NS15 1303 aa29.31■■■□□ 2.28
CTF1-202ENST00000395019 GPAA1O43292 621 aa29.31■■■□□ 2.28
CTF1-202ENST00000395019 DOK7Q18PE1 504 aa29.31■■■□□ 2.28
CTF1-202ENST00000395019 ADCK5Q3MIX3 580 aa29.31■■■□□ 2.28
CTF1-202ENST00000395019 JAKMIP1Q96N16 626 aaKnown RBP29.31■■■□□ 2.28
CTF1-202ENST00000395019 ZSWIM6Q9HCJ5 1215 aa29.31■■■□□ 2.28
CTF1-202ENST00000395019 RPAP1Q9BWH6 1393 aaPredicted RBP29.3■■■□□ 2.28
CTF1-202ENST00000395019 PPIP5K2O43314 1243 aa29.3■■■□□ 2.28
CTF1-202ENST00000395019 KIAA2012Q0VF49 1180 aa29.3■■■□□ 2.28
CTF1-202ENST00000395019 MAGEB6Q8N7X4 407 aa29.3■■■□□ 2.28
CTF1-202ENST00000395019 SPRYD3Q8NCJ5 442 aa29.3■■■□□ 2.28
CTF1-202ENST00000395019 SUPT20HQ8NEM7 779 aa29.3■■■□□ 2.28
CTF1-202ENST00000395019 ZC3H12CQ9C0D7 883 aaKnown RBP29.3■■■□□ 2.28
CTF1-202ENST00000395019 SLKQ9H2G2 1235 aaPredicted RBP29.3■■■□□ 2.28
CTF1-202ENST00000395019 CASTP20810 708 aaKnown RBP29.29■■■□□ 2.28
CTF1-202ENST00000395019 PSMA5P28066 241 aa29.29■■■□□ 2.28
CTF1-202ENST00000395019 TTC14Q96N46 770 aa29.29■■■□□ 2.28
CTF1-202ENST00000395019 EYA3Q99504 573 aa29.29■■■□□ 2.28
CTF1-202ENST00000395019 LRP2BPQ9P2M1 347 aa29.29■■■□□ 2.28
CTF1-202ENST00000395019 IARSP41252 1262 aaKnown RBP29.28■■■□□ 2.28
CTF1-202ENST00000395019 KRT32Q14532 448 aa29.28■■■□□ 2.28
CTF1-202ENST00000395019 DBNDD1Q9H9R9 158 aa29.28■■■□□ 2.28
CTF1-202ENST00000395019 TIAM2Q8IVF5 1701 aa29.27■■■□□ 2.28
CTF1-202ENST00000395019 FOXP2O15409 715 aa29.27■■■□□ 2.28
CTF1-202ENST00000395019 FRAT2O75474 233 aaPredicted RBP29.27■■■□□ 2.28
CTF1-202ENST00000395019 CYP21A2P08686 494 aa29.27■■■□□ 2.28
CTF1-202ENST00000395019 CYP46A1Q9Y6A2 500 aa29.27■■■□□ 2.28
CTF1-202ENST00000395019 PSME4Q14997 1843 aa29.26■■■□□ 2.27
CTF1-202ENST00000395019 RUFY3Q7L099 469 aa29.26■■■□□ 2.27
CTF1-202ENST00000395019 ABCF2Q9UG63 623 aa29.26■■■□□ 2.27
CTF1-202ENST00000395019 CTNNA3Q9UI47 895 aa29.26■■■□□ 2.27
CTF1-202ENST00000395019 TAF6LQ9Y6J9 622 aa29.26■■■□□ 2.27
CTF1-202ENST00000395019 ZNF804AQ7Z570 1209 aa29.25■■■□□ 2.27
CTF1-202ENST00000395019 LARGE2Q8N3Y3 721 aa29.25■■■□□ 2.27
CTF1-202ENST00000395019 HSP90AA1P07900 732 aaKnown RBP29.24■■■□□ 2.27
CTF1-202ENST00000395019 TDRD7Q8NHU6 1098 aaKnown RBP29.24■■■□□ 2.27
CTF1-202ENST00000395019 CD209Q9NNX6 404 aa29.24■■■□□ 2.27
CTF1-202ENST00000395019 KCNQ5Q9NR82 932 aa29.24■■■□□ 2.27
CTF1-202ENST00000395019 AIDAQ96BJ3 306 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 STRBPQ96SI9 672 aaKnown RBP29.23■■■□□ 2.27
CTF1-202ENST00000395019 YDJCA8MPS7 323 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 ECE2O60344 883 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 DDIT3P35638 169 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 TMX3Q96JJ7 454 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 PDRG1Q9NUG6 133 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 RAI14Q9P0K7 980 aa29.23■■■□□ 2.27
CTF1-202ENST00000395019 BLOC1S2Q6QNY1 142 aa29.22■■■□□ 2.27
CTF1-202ENST00000395019 COA1Q9GZY4 146 aa29.22■■■□□ 2.27
CTF1-202ENST00000395019 JAG2Q9Y219 1238 aa29.22■■■□□ 2.27
CTF1-202ENST00000395019 GRIN3BO60391 1043 aa29.21■■■□□ 2.27
CTF1-202ENST00000395019 IGSF3O75054 1194 aa29.21■■■□□ 2.27
CTF1-202ENST00000395019 IL1R1P14778 569 aa29.21■■■□□ 2.27
CTF1-202ENST00000395019 CPA1P15085 419 aa29.21■■■□□ 2.27
CTF1-202ENST00000395019 SALL1Q9NSC2 1324 aa29.2■■■□□ 2.27
CTF1-202ENST00000395019 FGAP02671 866 aa29.2■■■□□ 2.27
CTF1-202ENST00000395019 LMNB1P20700 586 aa29.2■■■□□ 2.27
CTF1-202ENST00000395019 AK2P54819 239 aa29.2■■■□□ 2.27
CTF1-202ENST00000395019 TMED8Q6PL24 325 aaPredicted RBP29.2■■■□□ 2.27
CTF1-202ENST00000395019 VPS33BQ9H267 617 aa29.2■■■□□ 2.27
CTF1-202ENST00000395019 CHMP5Q9NZZ3 219 aa29.2■■■□□ 2.27
CTF1-202ENST00000395019 CYP7A1P22680 504 aa29.2■■■□□ 2.26
CTF1-202ENST00000395019 RPS6KB1P23443 525 aa29.2■■■□□ 2.26
CTF1-202ENST00000395019 CHAF1AQ13111 956 aaPredicted RBP29.2■■■□□ 2.26
CTF1-202ENST00000395019 NEK1Q96PY6 1258 aa29.2■■■□□ 2.26
CTF1-202ENST00000395019 ALDH8A1Q9H2A2 487 aaPredicted RBP29.2■■■□□ 2.26
CTF1-202ENST00000395019 MBD4O95243 580 aa29.19■■■□□ 2.26
CTF1-202ENST00000395019 CUL4AQ13619 759 aa29.19■■■□□ 2.26
CTF1-202ENST00000395019 WDR66Q8TBY9 1149 aa29.19■■■□□ 2.26
CTF1-202ENST00000395019 G3V3G9 751 aa29.18■■■□□ 2.26
CTF1-202ENST00000395019 ALX1Q15699 326 aa29.18■■■□□ 2.26
CTF1-202ENST00000395019 DCAF8Q5TAQ9 597 aa29.18■■■□□ 2.26
CTF1-202ENST00000395019 TTLL5Q6EMB2 1281 aa29.18■■■□□ 2.26
CTF1-202ENST00000395019 ZGPATQ8N5A5 531 aaKnown RBP29.18■■■□□ 2.26
CTF1-202ENST00000395019 CIZ1Q9ULV3 898 aaPredicted RBP29.18■■■□□ 2.26
CTF1-202ENST00000395019 GNAT2P19087 354 aa29.17■■■□□ 2.26
CTF1-202ENST00000395019 IMMTQ16891 758 aaKnown RBP29.17■■■□□ 2.26
CTF1-202ENST00000395019 STOX1Q6ZVD7 989 aa29.17■■■□□ 2.26
CTF1-202ENST00000395019 NIM1KQ8IY84 436 aa29.17■■■□□ 2.26
CTF1-202ENST00000395019 RNF181Q9P0P0 153 aa29.17■■■□□ 2.26
CTF1-202ENST00000395019 LIMCH1Q9UPQ0 1083 aa29.17■■■□□ 2.26
CTF1-202ENST00000395019 ZMYM6O95789 1325 aa29.17■■■□□ 2.26
CTF1-202ENST00000395019 PATL2C9JE40 543 aaKnown RBP29.16■■■□□ 2.26
CTF1-202ENST00000395019 C9orf131Q5VYM1 1079 aa29.16■■■□□ 2.26
CTF1-202ENST00000395019 SPTY2D1Q68D10 685 aaPredicted RBP29.16■■■□□ 2.26
CTF1-202ENST00000395019 NAA16Q6N069 864 aaPredicted RBP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms