RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 CAPN15O75808 1086 aa28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 ATP2B3Q16720 1220 aa28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 LDLRAD1Q5T700 205 aa28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 ARMC9Q7Z3E5 817 aa28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 TDRD3Q9H7E2 651 aaKnown RBP28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 ZNF70Q9UC06 446 aaPredicted RBP28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 FZD1Q9UP38 647 aa28.62■■■□□ 2.17
PMS2P3-201ENST00000394921 ZBED9Q6R2W3 1325 aa28.61■■■□□ 2.17
PMS2P3-201ENST00000394921 ZKSCAN2Q63HK3 967 aa28.61■■■□□ 2.17
PMS2P3-201ENST00000394921 SRGAP3O43295 1099 aa28.6■■■□□ 2.17
PMS2P3-201ENST00000394921 HDLBPQ00341 1268 aaKnown RBP28.6■■■□□ 2.17
PMS2P3-201ENST00000394921 RASA3Q14644 834 aa28.6■■■□□ 2.17
PMS2P3-201ENST00000394921 ANGEL1Q9UNK9 670 aaKnown RBP28.6■■■□□ 2.17
PMS2P3-201ENST00000394921 NBPF12Q5TAG4 269 aaPredicted RBP28.59■■■□□ 2.17
PMS2P3-201ENST00000394921 TMEM57Q8N5G2 664 aa28.59■■■□□ 2.17
PMS2P3-201ENST00000394921 RNF186Q9NXI6 227 aa28.59■■■□□ 2.17
PMS2P3-201ENST00000394921 SAGE1Q9NXZ1 904 aa28.59■■■□□ 2.17
PMS2P3-201ENST00000394921 MAP3K11Q16584 847 aa28.58■■■□□ 2.17
PMS2P3-201ENST00000394921 REM2Q8IYK8 340 aaPredicted RBP28.58■■■□□ 2.17
PMS2P3-201ENST00000394921 SUGT1Q9Y2Z0 365 aa28.58■■■□□ 2.17
PMS2P3-201ENST00000394921 GNAI2P04899 355 aa28.57■■■□□ 2.16
PMS2P3-201ENST00000394921 MRIQ9BWK5 157 aa28.57■■■□□ 2.16
PMS2P3-201ENST00000394921 SUPT20HL1Q3ZLR7 823 aa28.56■■■□□ 2.16
PMS2P3-201ENST00000394921 TEKT1Q969V4 418 aa28.56■■■□□ 2.16
PMS2P3-201ENST00000394921 TRPA1O75762 1119 aa28.55■■■□□ 2.16
PMS2P3-201ENST00000394921 ADORA1P30542 326 aa28.55■■■□□ 2.16
PMS2P3-201ENST00000394921 PHKA1P46020 1223 aa28.55■■■□□ 2.16
PMS2P3-201ENST00000394921 TNFAIP1Q13829 316 aa28.55■■■□□ 2.16
PMS2P3-201ENST00000394921 WDR66Q8TBY9 1149 aa28.55■■■□□ 2.16
PMS2P3-201ENST00000394921 TEPSINQ96N21 525 aa28.55■■■□□ 2.16
PMS2P3-201ENST00000394921 CDAN1Q8IWY9 1227 aa28.54■■■□□ 2.16
PMS2P3-201ENST00000394921 ZDHHC15Q96MV8 337 aa28.54■■■□□ 2.16
PMS2P3-201ENST00000394921 PNMA6EA0A0J9YXQ4 647 aa28.53■■■□□ 2.16
PMS2P3-201ENST00000394921 ZBTB22O15209 634 aa28.53■■■□□ 2.16
PMS2P3-201ENST00000394921 PPP1R12BO60237 982 aaPredicted RBP28.53■■■□□ 2.16
PMS2P3-201ENST00000394921 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.53■■■□□ 2.16
PMS2P3-201ENST00000394921 MAST3O60307 1309 aa28.53■■■□□ 2.16
PMS2P3-201ENST00000394921 TCP10L2B9ZVM9 353 aa28.52■■■□□ 2.16
PMS2P3-201ENST00000394921 USP2O75604 605 aaPredicted RBP28.52■■■□□ 2.16
PMS2P3-201ENST00000394921 MKRN3Q13064 507 aaKnown RBP28.52■■■□□ 2.16
PMS2P3-201ENST00000394921 APOBEC3HQ6NTF7 200 aaKnown RBP28.52■■■□□ 2.16
PMS2P3-201ENST00000394921 CLMNQ96JQ2 1002 aa28.52■■■□□ 2.16
PMS2P3-201ENST00000394921 TIMM10P62072 90 aa28.51■■■□□ 2.15
PMS2P3-201ENST00000394921 TFCP2Q12800 502 aa28.51■■■□□ 2.15
PMS2P3-201ENST00000394921 SPRYD7Q5W111 196 aa28.51■■■□□ 2.15
PMS2P3-201ENST00000394921 HHIPL2Q6UWX4 724 aa28.51■■■□□ 2.15
PMS2P3-201ENST00000394921 GNL3LQ9NVN8 582 aaKnown RBP28.51■■■□□ 2.15
PMS2P3-201ENST00000394921 RLBP1P12271 317 aa28.5■■■□□ 2.15
PMS2P3-201ENST00000394921 TM4SF4P48230 202 aa28.5■■■□□ 2.15
PMS2P3-201ENST00000394921 CACNB3P54284 484 aa28.5■■■□□ 2.15
PMS2P3-201ENST00000394921 CCDC102BQ68D86 513 aa28.5■■■□□ 2.15
PMS2P3-201ENST00000394921 TMEM39BQ9GZU3 492 aa28.5■■■□□ 2.15
PMS2P3-201ENST00000394921 OTOFQ9HC10 1997 aa28.49■■■□□ 2.15
PMS2P3-201ENST00000394921 SEMA3EO15041 775 aa28.49■■■□□ 2.15
PMS2P3-201ENST00000394921 ABHD8Q96I13 439 aa28.49■■■□□ 2.15
PMS2P3-201ENST00000394921 DENND2AQ9ULE3 1009 aa28.49■■■□□ 2.15
PMS2P3-201ENST00000394921 SALL1Q9NSC2 1324 aa28.49■■■□□ 2.15
PMS2P3-201ENST00000394921 A0A1B0GUL7 405 aa28.48■■■□□ 2.15
PMS2P3-201ENST00000394921 UNCXA6NJT0 531 aa28.48■■■□□ 2.15
PMS2P3-201ENST00000394921 PRDX5P30044 214 aa28.48■■■□□ 2.15
PMS2P3-201ENST00000394921 SLC10A4Q96EP9 437 aa28.48■■■□□ 2.15
PMS2P3-201ENST00000394921 IREB2P48200 963 aaKnown RBP28.47■■■□□ 2.15
PMS2P3-201ENST00000394921 TNNI2P48788 182 aa28.47■■■□□ 2.15
PMS2P3-201ENST00000394921 XAGE2Q96GT9 111 aa28.47■■■□□ 2.15
PMS2P3-201ENST00000394921 LAMB1P07942 1786 aa28.47■■■□□ 2.15
PMS2P3-201ENST00000394921 DIXDC1Q155Q3 683 aa28.46■■■□□ 2.15
PMS2P3-201ENST00000394921 FKBP1CQ5VVH2 108 aa28.46■■■□□ 2.15
PMS2P3-201ENST00000394921 FTSJ3Q8IY81 847 aaKnown RBP28.46■■■□□ 2.15
PMS2P3-201ENST00000394921 WNK4Q96J92 1243 aa28.46■■■□□ 2.15
PMS2P3-201ENST00000394921 AKAP2Q9Y2D5 859 aa28.46■■■□□ 2.15
PMS2P3-201ENST00000394921 DAGLAQ9Y4D2 1042 aa28.46■■■□□ 2.15
PMS2P3-201ENST00000394921 RASGRF1Q13972 1273 aa28.45■■■□□ 2.15
PMS2P3-201ENST00000394921 POLA2Q14181 598 aa28.45■■■□□ 2.15
PMS2P3-201ENST00000394921 LDHBP07195 334 aaKnown RBP28.44■■■□□ 2.14
PMS2P3-201ENST00000394921 FAM83AQ86UY5 434 aa28.44■■■□□ 2.14
PMS2P3-201ENST00000394921 ANKRD13AQ8IZ07 590 aa28.44■■■□□ 2.14
PMS2P3-201ENST00000394921 MCOLN1Q9GZU1 580 aa28.44■■■□□ 2.14
PMS2P3-201ENST00000394921 C1orf115Q9H7X2 142 aa28.44■■■□□ 2.14
PMS2P3-201ENST00000394921 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.44■■■□□ 2.14
PMS2P3-201ENST00000394921 ZBTB7BO15156 539 aaPredicted RBP28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 ZBTB48P10074 688 aaPredicted RBP28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 ATP8B2P98198 1209 aa28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 SREBF2Q12772 1141 aa28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 ITPRIPQ8IWB1 547 aa28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 TMOD2Q9NZR1 351 aa28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 PDS5AQ29RF7 1337 aaKnown RBP28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 GJA5P36382 358 aa28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 G3BP1Q13283 466 aaKnown RBP eCLIP28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 SSH3Q8TE77 659 aa28.43■■■□□ 2.14
PMS2P3-201ENST00000394921 TBC1D8O95759 1140 aa28.42■■■□□ 2.14
PMS2P3-201ENST00000394921 MVPQ14764 893 aaKnown RBP28.42■■■□□ 2.14
PMS2P3-201ENST00000394921 MYH2Q9UKX2 1941 aa28.41■■■□□ 2.14
PMS2P3-201ENST00000394921 MANSC4A6NHS7 340 aaPredicted RBP28.41■■■□□ 2.14
PMS2P3-201ENST00000394921 DGKZQ13574 1117 aa28.41■■■□□ 2.14
PMS2P3-201ENST00000394921 CDC42EP5Q6NZY7 148 aa28.41■■■□□ 2.14
PMS2P3-201ENST00000394921 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.41■■■□□ 2.14
PMS2P3-201ENST00000394921 NEUROD6Q96NK8 337 aa28.41■■■□□ 2.14
PMS2P3-201ENST00000394921 RPAP1Q9BWH6 1393 aaPredicted RBP28.4■■■□□ 2.14
PMS2P3-201ENST00000394921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.4■■■□□ 2.14
PMS2P3-201ENST00000394921 ZGPATQ8N5A5 531 aaKnown RBP28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms