RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 GRIN1Q05586 938 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 ERCC4Q92889 916 aaPredicted RBP10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 RNF113AO15541 343 aaKnown RBP10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 BRF1Q92994 677 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 DSCC1Q9BVC3 393 aa10.14□□□□□ -0.79
GAPVD1-204ENST00000394083 RXRAP19793 462 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 HSP90AB4PQ58FF6 505 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 LRRC15Q8TF66 581 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 TRMT112Q9UI30 125 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 RBM43Q6ZSC3 357 aaKnown RBP10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 PPP1R9BQ96SB3 815 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 NID2Q14112 1375 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 FKBP4Q02790 459 aaKnown RBP eCLIP10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 SLC10A5Q5PT55 438 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 LDHAL6AQ6ZMR3 332 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 ENGASEQ8NFI3 743 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 CHMP3Q9Y3E7 222 aa10.13□□□□□ -0.79
GAPVD1-204ENST00000394083 MRVI1Q9Y6F6 885 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 OS9Q13438 667 aaPredicted RBP10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 SF3B3Q15393 1217 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 MYL10Q9BUA6 226 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 DIAPH3Q9NSV4 1193 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 IFIT1P09914 478 aaKnown RBP10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 PFKFB2O60825 505 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 NR1I2O75469 434 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 ATP2B3Q16720 1220 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 PCDHAC2Q9Y5I4 1007 aa10.12□□□□□ -0.79
GAPVD1-204ENST00000394083 SHROOM1Q2M3G4 852 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 CMTR1Q8N1G2 835 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 GJD4Q96KN9 370 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 RLFQ13129 1914 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 TOB1P50616 345 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 DYNLL1P63167 89 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 CWC22Q9HCG8 908 aaKnown RBP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 ZSWIM5Q9P217 1185 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 ST18O60284 1047 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 NMT2O60551 498 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 SEC23AQ15436 765 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 SDR42E1Q8WUS8 393 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 HELLSQ9NRZ9 838 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 NIP7Q9Y221 180 aaKnown RBP eCLIP10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 FAM205CA6NFA0 338 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 BMP6P22004 513 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 PRDX5P30044 214 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 JAG2Q9Y219 1238 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 SPEGQ15772 3267 aa10.11□□□□□ -0.79
GAPVD1-204ENST00000394083 AFF2P51816 1311 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 STARD3NLO95772 234 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 GYS1P13807 737 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 CCT2P78371 535 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 KCNF1Q9H3M0 494 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 LCTP09848 1927 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 IFIT5Q13325 482 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 RCSD1Q6JBY9 416 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 FOXP4Q8IVH2 680 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 TFIP11Q9UBB9 837 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 WDHD1O75717 1129 aaPredicted RBP10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 CRY2Q49AN0 593 aa10.1□□□□□ -0.79
GAPVD1-204ENST00000394083 SPATA5Q8NB90 893 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 KCNQ5Q9NR82 932 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 PAPPA2Q9BXP8 1791 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 FANCGO15287 622 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 FBXO33Q7Z6M2 555 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 PHIPQ8WWQ0 1821 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 MAP3K14Q99558 947 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 ARMT1Q9H993 441 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 FBXO3Q9UK99 471 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 FGRP09769 529 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 PKN1Q16512 942 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 USP28Q96RU2 1077 aa10.09□□□□□ -0.79
GAPVD1-204ENST00000394083 UBAP1LF5GYI3 381 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 RBAK-RBAKDNI3L0D1 243 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 CYP2D6P10635 497 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 CCDC57Q2TAC2 916 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 AXDND1Q5T1B0 1012 aaPredicted RBP10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 SLC9C2Q5TAH2 1124 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 APPBP2Q92624 585 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 USP21Q9UK80 565 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 ATAD5Q96QE3 1844 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 NARFQ9UHQ1 456 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 GIMAP6Q6P9H5 292 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 TYW1BQ6NUM6 668 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 DHX32Q7L7V1 743 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 IL17RBQ9NRM6 502 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 CYP46A1Q9Y6A2 500 aa10.08□□□□□ -0.8
GAPVD1-204ENST00000394083 A0A087X0B3 334 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 NKRFO15226 690 aaKnown RBP eCLIP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 PTPAQ15257 358 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 KLRG2A4D1S0 409 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 METTL24Q5JXM2 366 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 MIGA1Q8NAN2 632 aa10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 LEO1Q8WVC0 666 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 NSUN4Q96CB9 384 aaKnown RBP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 SH2B2O14492 632 aaPredicted RBP10.07□□□□□ -0.8
GAPVD1-204ENST00000394083 DDX11L8A8MPP1 907 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms