RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 WIPF1O43516 503 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 RASSF7Q02833 373 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 NBPF10Q6P3W6 841 aaKnown RBP6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 RIPOR1Q6ZS17 1223 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 GPR161Q8N6U8 529 aaKnown RBP6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 UCN2Q96RP3 112 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 SERTAD1Q9UHV2 236 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 HRH3Q9Y5N1 445 aa6.9□□□□□ -1.31
TSPAN8-202ENST00000393330 LZTS3O60299 673 aaPredicted RBP6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 INHAP05111 366 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 VSIG8P0DPA2 414 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 SCNN1DP51172 638 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 TLR1Q15399 786 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 SV2AQ7L0J3 742 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 TICAM2Q86XR7 235 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 CNTROBQ8N137 903 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 IPO4Q8TEX9 1081 aaKnown RBP6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 PCGF6Q9BYE7 350 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 TIMMDC1Q9NPL8 285 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 PCDHGA11Q9Y5H2 935 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 SLIT3O75094 1523 aa6.89□□□□□ -1.31
TSPAN8-202ENST00000393330 SPATA31C2B4DYI2 1134 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 ATP9BO43861 1147 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 GTF2IP78347 998 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 INSM1Q01101 510 aaPredicted RBP6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 GRM1Q13255 1194 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 GNASQ5JWF2 1037 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 TRAPPC3LQ5T215 181 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 PNMA8AQ86V59 439 aaPredicted RBP6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 TAF1DQ9H5J8 278 aaPredicted RBP6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 CUEDC1Q9NWM3 386 aaPredicted RBP6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 TFIP11Q9UBB9 837 aaKnown RBP6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 LY75O60449 1722 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 PALLDQ8WX93 1383 aa6.88□□□□□ -1.31
TSPAN8-202ENST00000393330 USP17L3A6NCW0 530 aa6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 USP17L4A6NCW7 530 aa6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 NCLP19338 710 aaKnown RBP6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 USP17L2Q6R6M4 530 aa6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 USP17L1Q7RTZ2 530 aa6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 NANOS1Q8WY41 292 aaKnown RBP6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 DYRK1BQ9Y463 629 aa6.87□□□□□ -1.31
TSPAN8-202ENST00000393330 TMEM229AB2RXF0 380 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 DDNO94850 711 aaPredicted RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 PKN2Q16513 984 aaKnown RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 NBPF1Q3BBV0 1214 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 EAPPQ56P03 285 aaPredicted RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 ZCRB1Q8TBF4 217 aaKnown RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 DDX21Q9NR30 783 aaKnown RBP eCLIP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 ITSN1Q15811 1721 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 KIF13BQ9NQT8 1826 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 ARFGEF1Q9Y6D6 1849 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 SMTNP53814 917 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 WDR44Q5JSH3 913 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 CTU1Q7Z7A3 348 aaKnown RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 ANKRD24Q8TF21 1146 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 CNTNAP3BQ96NU0 1288 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 CNTNAP3Q9BZ76 1288 aa6.86□□□□□ -1.31
TSPAN8-202ENST00000393330 USP54Q70EL1 1684 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 A0A0C4DFX4 3053 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 AOC2O75106 756 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 CLSTN1O94985 981 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 CHRNA5P30532 468 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 DBN1Q16643 649 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 TRIM50Q86XT4 487 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 PLEKHM2Q8IWE5 1019 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 TTLL6Q8N841 843 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 HHIPL1Q96JK4 782 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 GPAMQ9HCL2 828 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 HACL1Q9UJ83 578 aa6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 RTCBQ9Y3I0 505 aaKnown RBP6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 N4BP2Q86UW6 1770 aaPredicted RBP6.85□□□□□ -1.31
TSPAN8-202ENST00000393330 KIAA1551Q9HCM1 1747 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 PALM3A6NDB9 673 aaPredicted RBP6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 NFKBIEO00221 500 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 F11P03951 625 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 RFC4P35249 363 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 AKAP4Q5JQC9 854 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 MAP1SQ66K74 1059 aaPredicted RBP6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 RHBDD1Q8TEB9 315 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 SAGE1Q9NXZ1 904 aa6.84□□□□□ -1.31
TSPAN8-202ENST00000393330 H7C1W4 665 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 BACH1O14867 736 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 ZBTB7BO15156 539 aaPredicted RBP6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 GYS1P13807 737 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 PLA2G4AP47712 749 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 CLDN10P78369 228 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 KRT76Q01546 638 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 RNFT1Q5M7Z0 435 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 CCDC102BQ68D86 513 aa6.83□□□□□ -1.32
TSPAN8-202ENST00000393330 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms