RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SASH3O75995 380 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 SLC4A2P04920 1241 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 POLE2P56282 527 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 MYO1EQ12965 1108 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 INF2Q27J81 1249 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 CEP128Q6ZU80 1094 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 RPAP2Q8IXW5 612 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TMEM87AQ8NBN3 555 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 PARD3BQ8TEW8 1205 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 CPLX3Q8WVH0 158 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TUBB2AQ13885 445 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 ACBD5Q5T8D3 534 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-201ENST00000393077 CPLX4Q7Z7G2 160 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TRIM58Q8NG06 486 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TUBB2BQ9BVA1 445 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 PPP1R12CQ9BZL4 782 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 ATG3Q9NT62 314 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TTC21BQ7Z4L5 1316 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TSPOAP1O95153 1857 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 PECAM1P16284 738 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-201ENST00000393077 PARP9Q8IXQ6 854 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 SEC62Q99442 399 aaKnown RBP8.63□□□□□ -1.03
VTI1A-201ENST00000393077 TPCN1Q9ULQ1 816 aa8.63□□□□□ -1.03
VTI1A-201ENST00000393077 NSD2O96028 1365 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 PPFIA2O75334 1257 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 SLC3A2P08195 630 aaKnown RBP8.62□□□□□ -1.03
VTI1A-201ENST00000393077 DESP17661 470 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 AIMP1Q12904 312 aaKnown RBP8.62□□□□□ -1.03
VTI1A-201ENST00000393077 CUL4AQ13619 759 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 CCDC38Q502W7 563 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 TRIM68Q6AZZ1 485 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 ARFGAP2Q8N6H7 521 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 TCHPQ9BT92 498 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 KDM5DQ9BY66 1539 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 MAGI2Q86UL8 1455 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 N4BP1O75113 896 aaKnown RBP8.62□□□□□ -1.03
VTI1A-201ENST00000393077 CLTAP09496 248 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 CUL3Q13618 768 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 SLMAPQ14BN4 828 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-201ENST00000393077 TCP11Q8WWU5 503 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 ZKSCAN4Q969J2 545 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-201ENST00000393077 VCXQ9H320 206 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 PPP2R2CQ9Y2T4 447 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 E7EVH7 732 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 MEFVO15553 781 aaPredicted RBP8.62□□□□□ -1.03
VTI1A-201ENST00000393077 CEP104O60308 925 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 RPS6KA3P51812 740 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 MAATS1Q7Z4T9 603 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 TTC5Q8N0Z6 440 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 IGSF22Q8N9C0 903 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 PRDM16Q9HAZ2 1276 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 TRPM2O94759 1503 aa8.62□□□□□ -1.03
VTI1A-201ENST00000393077 KDM5CP41229 1560 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 HSPA2P54652 639 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 SNX1Q13596 522 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 KCNB1Q14721 858 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ANKRD1Q15327 319 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ANKS4BQ8N8V4 417 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 DDX54Q8TDD1 881 aaKnown RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 DHX58Q96C10 678 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ACTR5Q9H9F9 607 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 STRN4Q9NRL3 753 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 C21orf2O43822 256 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 GSPT1P15170 499 aaKnown RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 SLC8A3P57103 927 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 SPECC1LQ69YQ0 1117 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 TTC6Q86TZ1 520 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ARL10Q8N8L6 244 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 NECAB1Q8N987 351 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 EHBP1Q8NDI1 1231 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 DDX27Q96GQ7 796 aaKnown RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 GPATCH3Q96I76 525 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 RPS6KA5O75582 802 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 AK2P54819 239 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 CKAP4Q07065 602 aaKnown RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 PLEKHO1Q53GL0 409 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ZNF365Q70YC5 407 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 LRRN4CLQ8ND94 238 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 PUS7Q96PZ0 661 aaKnown RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 FAM53CQ9NYF3 392 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 CCT2P78371 535 aaKnown RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 LACTBP83111 547 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ICA1Q05084 483 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 CCDC57Q2TAC2 916 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 ALDH1L2Q3SY69 923 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 SDCCAG8Q86SQ7 713 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 KIAA0825Q8IV33 1275 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 CNTROBQ8N137 903 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 PHACTR3Q96KR7 559 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 TMEM165Q9HC07 324 aa8.61□□□□□ -1.03
VTI1A-201ENST00000393077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.61□□□□□ -1.039e-8■■■■■ 155.4
VTI1A-201ENST00000393077 C9orf78Q9NZ63 289 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-201ENST00000393077 PLXNC1O60486 1568 aa8.6□□□□□ -1.03
VTI1A-201ENST00000393077 POLR3AO14802 1390 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms