RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CTAGE4Q8IX94 777 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ZNF710Q8N1W2 664 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ZNF713Q8N859 430 aaPredicted RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CEP120Q8N960 986 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SPRYD3Q8NCJ5 442 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CCDC191Q8NCU4 936 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 MSANTD4Q8NCY6 345 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NGDNQ8NEJ9 315 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CCDC148Q8NFR7 591 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 FBXO18Q8NFZ0 1043 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CFAP61Q8NHU2 1237 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NCOA7Q8NI08 942 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 STAG1Q8WVM7 1258 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 DDX12PQ92771 950 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 DCAF5Q96JK2 942 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 GSDMAQ96QA5 445 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 ARXQ96QS3 562 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SLC26A8Q96RN1 970 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 RBM42Q9BTD8 480 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 PAGR1Q9BTK6 254 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 NACAP1Q9BZK3 213 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 UBXN6Q9BZV1 441 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 KRT23Q9C075 422 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 LRRC27Q9C0I9 530 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 FOXP1Q9H334 677 aaPredicted RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TMX1Q9H3N1 280 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 DEF6Q9H4E7 631 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 HAUS4Q9H6D7 363 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 C1orf115Q9H7X2 142 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TTC12Q9H892 705 aaPredicted RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CBX8Q9HC52 389 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 A1CFQ9NQ94 594 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 RBM28Q9NW13 759 aaKnown RBP2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 RAB21Q9UL25 225 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 SPG7Q9UQ90 795 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 CNPY2Q9Y2B0 182 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 MRFAP1Q9Y605 127 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 STK24Q9Y6E0 443 aa2.28□□□□□ -2.04
TRAJ49-201ENST00000390488 TJP1Q07157 1748 aa2.28□□□□□ -2.05
TRAJ49-201ENST00000390488 TIAM2Q8IVF5 1701 aa2.28□□□□□ -2.05
TRAJ49-201ENST00000390488 RREB1Q92766 1687 aa2.28□□□□□ -2.05
TRAJ49-201ENST00000390488 LRP5O75197 1615 aa2.28□□□□□ -2.05
TRAJ49-201ENST00000390488 LRP6O75581 1613 aa2.28□□□□□ -2.05
TRAJ49-201ENST00000390488 CICQ96RK0 1608 aaPredicted RBP2.28□□□□□ -2.05
TRAJ49-201ENST00000390488 DISP2A7MBM2 1401 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 ZNF609O15014 1411 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CDHR2Q9BYE9 1310 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PRR36Q9H6K5 1346 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PNMA6EA0A0J9YXQ4 647 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 A0A1B0GUL7 405 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 GOLGA6L7A0A1B0GV03 622 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 SHTN1A0MZ66 631 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 BICDL2A1A5D9 508 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 ERICH2A1L162 156 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PTPDC1A2A3K4 754 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CTAGE9A4FU28 777 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 BTBD11A6QL63 1104 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CES2O00748 559 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 MAP2K7O14733 419 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 NDC80O14777 642 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 FOXP2O15409 715 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 KRT86O43790 486 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 OPA1O60313 960 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 TAF5LO75529 589 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 SASH1O94885 1247 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 SERPINC1P01008 464 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 SNRPA1P09661 255 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 UQCRFS1P1P0C7P4 283 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PNMA6AP0CW24 399 aaPredicted RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 EPB41P11171 864 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 TCP1P17987 556 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 ERCC3P19447 782 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PTGS1P23219 599 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 U2AF2P26368 475 aaKnown RBP eCLIP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CALML3P27482 149 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CASQ1P31415 396 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CYLC1P35663 651 aaPredicted RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 MAGEA9P43362 315 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 SYKP43405 635 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CHMP4BP1P59074 171 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 MAP3K9P80192 1104 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PLCB2Q00722 1185 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 AKAP17AQ02040 695 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 PPP2R3AQ06190 1150 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 ARID5BQ14865 1188 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 SLC39A14Q15043 492 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 RRS1Q15050 365 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 UBE3CQ15386 1083 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 IFI16Q16666 785 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 ZSCAN26Q16670 478 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 KIAA0753Q2KHM9 967 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CFAP100Q494V2 611 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 CCDC38Q502W7 563 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 ARHGAP29Q52LW3 1261 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 COBLL1Q53SF7 1204 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 TNNI3KQ59H18 835 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 DNAJC21Q5F1R6 531 aaKnown RBP2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 MCTP2Q6DN12 878 aa2.27□□□□□ -2.05
TRAJ49-201ENST00000390488 TTLL5Q6EMB2 1281 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms