RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 GSC2O15499 205 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 MED26O95402 600 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 MAOBP27338 520 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 SSTR4P31391 388 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 GRM2Q14416 872 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 C2CD4AQ8NCU7 369 aaPredicted RBP6.58□□□□□ -1.36
TRAV40-201ENST00000390467 FAM83CQ9BQN1 747 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 DBNDD2Q9BQY9 259 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 DCTN4Q9UJW0 460 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 HIF3AQ9Y2N7 669 aa6.58□□□□□ -1.36
TRAV40-201ENST00000390467 GADD45BO75293 160 aaPredicted RBP6.57□□□□□ -1.36
TRAV40-201ENST00000390467 MAP4P27816 1152 aaKnown RBP6.57□□□□□ -1.36
TRAV40-201ENST00000390467 CD97P48960 835 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 FAAP100Q0VG06 881 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 POU4F3Q15319 338 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 SLC51AQ86UW1 340 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 CLEC10AQ8IUN9 316 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 C12orf50Q8NA57 414 aaPredicted RBP6.57□□□□□ -1.36
TRAV40-201ENST00000390467 CYP4F12Q9HCS2 524 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 IVNS1ABPQ9Y6Y0 642 aa6.57□□□□□ -1.36
TRAV40-201ENST00000390467 TMEM238LA0A1B0GVL6 79 aa6.56□□□□□ -1.36
TRAV40-201ENST00000390467 ADH5P11766 374 aa6.56□□□□□ -1.36
TRAV40-201ENST00000390467 MAPK1P28482 360 aa6.56□□□□□ -1.36
TRAV40-201ENST00000390467 DSC3Q14574 896 aa6.56□□□□□ -1.36
TRAV40-201ENST00000390467 EXOSC6Q5RKV6 272 aaKnown RBP6.56□□□□□ -1.36
TRAV40-201ENST00000390467 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
TRAV40-201ENST00000390467 PRR19A6NJB7 356 aa6.55□□□□□ -1.36
TRAV40-201ENST00000390467 TREHO43280 583 aa6.55□□□□□ -1.36
TRAV40-201ENST00000390467 PTPN12Q05209 780 aaKnown RBP6.55□□□□□ -1.36
TRAV40-201ENST00000390467 SOX4Q06945 474 aaPredicted RBP6.55□□□□□ -1.36
TRAV40-201ENST00000390467 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
TRAV40-201ENST00000390467 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
TRAV40-201ENST00000390467 SHKBP1Q8TBC3 707 aa6.55□□□□□ -1.36
TRAV40-201ENST00000390467 FBLIM1Q8WUP2 373 aa6.55□□□□□ -1.36
TRAV40-201ENST00000390467 PNMA6FA0A0J9YX94 578 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 CYP11A1P05108 521 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 RXRBP28702 533 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
TRAV40-201ENST00000390467 MFSD14AQ96MC6 490 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 PCMTD2Q9NV79 361 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 ACTL7BQ9Y614 415 aa6.54□□□□□ -1.36
TRAV40-201ENST00000390467 KIAA1324LA8MWY0 1029 aaPredicted RBP6.53□□□□□ -1.36
TRAV40-201ENST00000390467 FCGRTP55899 365 aa6.53□□□□□ -1.36
TRAV40-201ENST00000390467 ENOX2Q16206 610 aaKnown RBP6.53□□□□□ -1.36
TRAV40-201ENST00000390467 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
TRAV40-201ENST00000390467 CORO1BQ9BR76 489 aa6.53□□□□□ -1.36
TRAV40-201ENST00000390467 TRAK1Q9UPV9 953 aa6.53□□□□□ -1.36
TRAV40-201ENST00000390467 ADAMTS4O75173 837 aa6.52□□□□□ -1.37
TRAV40-201ENST00000390467 F13BP05160 661 aa6.52□□□□□ -1.37
TRAV40-201ENST00000390467 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRAV40-201ENST00000390467 RPS26P11Q5JNZ5 115 aaPredicted RBP6.52□□□□□ -1.37
TRAV40-201ENST00000390467 WDR18Q9BV38 432 aa6.52□□□□□ -1.37
TRAV40-201ENST00000390467 BCO2Q9BYV7 579 aa6.52□□□□□ -1.37
TRAV40-201ENST00000390467 FAM95CA0A1B0GW59 222 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
TRAV40-201ENST00000390467 COBLO75128 1261 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 SPINK2P20155 84 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 RAB6AP20340 208 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
TRAV40-201ENST00000390467 ADMP35318 185 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 USP11P51784 963 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 KCNA1Q09470 495 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 AP3B2Q13367 1082 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 PDE3AQ14432 1141 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 DTHD1Q6ZMT9 781 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 FBXL6Q8N531 539 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 EZH1Q92800 747 aaPredicted RBP6.51□□□□□ -1.37
TRAV40-201ENST00000390467 WDR89Q96FK6 387 aaPredicted RBP6.51□□□□□ -1.37
TRAV40-201ENST00000390467 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 CCDC86Q9H6F5 360 aaKnown RBP6.51□□□□□ -1.37
TRAV40-201ENST00000390467 FAM105AQ9NUU6 356 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 NLRP2Q9NX02 1062 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
TRAV40-201ENST00000390467 AOC2O75106 756 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 FMR1Q06787 632 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAV40-201ENST00000390467 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 NXPE4Q6UWF7 544 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 C3orf58Q8NDZ4 430 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
TRAV40-201ENST00000390467 GATA6Q92908 595 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 ZC3H12CQ9C0D7 883 aaKnown RBP6.5□□□□□ -1.37
TRAV40-201ENST00000390467 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 PPP1R9AQ9ULJ8 1098 aa6.5□□□□□ -1.37
TRAV40-201ENST00000390467 ZNF862O60290 1169 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 LIG1P18858 919 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 MAPK8P45983 427 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 PLCB3Q01970 1234 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 PAOXQ6QHF9 649 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 PDZD3Q86UT5 571 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 STK35Q8TDR2 534 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 ASB16Q96NS5 453 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 SEMA6CQ9H3T2 930 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
TRAV40-201ENST00000390467 ACSS3Q9H6R3 686 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 RAD18Q9NS91 495 aa6.49□□□□□ -1.37
TRAV40-201ENST00000390467 GPN3Q9UHW5 284 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms