RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PRSS44E7EML9 344 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TNFRSF13BO14836 293 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RECQL4O94761 1208 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PLATP00750 562 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 NR4A1P22736 598 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CD96P40200 585 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MCAMP43121 646 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 AFF1P51825 1210 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 KRTAP12-3P60328 96 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TBC1D10BQ4KMP7 808 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 HDGFL2Q7Z4V5 671 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 OAFQ86UD1 273 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 REXO1Q8N1G1 1221 aaKnown RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 AGGF1Q8N302 714 aaeCLIP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FBXL6Q8N531 539 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FBXO22Q8NEZ5 403 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LRRN4Q8WUT4 740 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PRRX2Q99811 253 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SLC29A3Q9BZD2 475 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZNF395Q9H8N7 513 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TTC28Q96AY4 2481 aa-0.93□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PTGIRP43119 386 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 VASPP50552 380 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZNF268Q14587 947 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ICAM4Q14773 271 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 Q3C1V9 767 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 WDR44Q5JSH3 913 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 GLDNQ6ZMI3 551 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 C15orf39Q6ZRI6 1047 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RAPH1Q70E73 1250 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PALM2Q8IXS6 379 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SRRM1Q8IYB3 904 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ULK2Q8IYT8 1036 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SAMD14Q8IZD0 417 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SPAG16Q8N0X2 631 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MIER1Q8N108 512 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 KDF1Q8NAX2 398 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 GPR150Q8NGU9 434 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TNFRSF25Q93038 417 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SIGLEC10Q96LC7 697 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TMEM209Q96SK2 561 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SGPP1Q9BX95 441 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RIOX1Q9H6W3 641 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PRDM7Q9NQW5 492 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 NOVA2Q9UNW9 492 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 NTNG1Q9Y2I2 539 aa-0.94□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZNF318Q5VUA4 2279 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 U2SURPO15042 1029 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SIN3BO75182 1162 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 EYA4O95677 639 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 MAPTP10636 758 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 COL6A1P12109 1028 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 EWSR1Q01844 656 aaKnown RBP eCLIP-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PDE3BQ13370 1112 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 NT5DC1Q5TFE4 455 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RHBDF2Q6PJF5 856 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CYFIP1Q7L576 1253 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZC3HAV1Q7Z2W4 902 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FAM174AQ8TBP5 190 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 DDX1Q92499 740 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LNPKQ9C0E8 428 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 GPAMQ9HCL2 828 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 C19orf73Q9NVV2 129 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FOXJ2Q9P0K8 574 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 KIAA1522Q9P206 1035 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 VAV3Q9UKW4 847 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SLC27A5Q9Y2P5 690 aa-0.95□□□□□ -2.56
RNU6-1340P-201ENST00000384438 FFAR3O14843 346 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZBTB7BO15156 539 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 C1SP09871 688 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 BMP3P12645 472 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 RFX1P22670 979 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ADMP35318 185 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CXCR3P49682 368 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PRKCQQ04759 706 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 CKAP4Q07065 602 aaKnown RBP-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 LSM12Q3MHD2 195 aaKnown RBP-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZC3H12AQ5D1E8 599 aaKnown RBP-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 XKR6Q5GH73 641 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 KIAA1161Q6NSJ0 714 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZDHHC17Q8IUH5 632 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 DNERQ8NFT8 737 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 GATA6Q92908 595 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 KREMEN1Q96MU8 473 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 WWC2-AS2Q96NR7 200 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TTPALQ9BTX7 342 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 C1QTNF5Q9BXJ0 243 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 GPHNQ9NQX3 736 aaPredicted RBP-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 USP40Q9NVE5 1235 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TTF2Q9UNY4 1162 aaKnown RBP-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 IRAK3Q9Y616 596 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 TAF6LQ9Y6J9 622 aa-0.96□□□□□ -2.56
RNU6-1340P-201ENST00000384438 SNED1Q8TER0 1413 aa-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 IGKV6D-21A0A0A0MT36 114 aa-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 A6NHS1 94 aa-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 ZAR1LA6NP61 321 aa-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PER1O15534 1290 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 NOBOXO60393 691 aa-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 PLGP00747 810 aaPredicted RBP-0.97□□□□□ -2.56
RNU6-1340P-201ENST00000384438 IGKV2-30P06310 120 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms