RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 KRT32Q14532 448 aa21.69■■□□□ 1.06
SMARCD1-201ENST00000381513 SPTLC2O15270 562 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 EIF2S2P20042 333 aaKnown RBP21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 HSP90AB3PQ58FF7 597 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 NOA1Q8NC60 698 aaKnown RBP21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 HSD3B7Q9H2F3 369 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 HMG20BQ9P0W2 317 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 ADGRB3O60242 1522 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 NEDD9Q14511 834 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 CTCFLQ8NI51 663 aaPredicted RBP21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 SYF2O95926 243 aaKnown RBP21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 MARCKSP29966 332 aaPredicted RBP21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 SYNE3Q6ZMZ3 975 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 TC2NQ8N9U0 490 aa21.68■■□□□ 1.06
SMARCD1-201ENST00000381513 ATL3Q6DD88 541 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 ZFYVE16Q7Z3T8 1539 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 ELF1P32519 619 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 IDI1Q13907 227 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 OTUD6BQ8N6M0 293 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 A0A1W2PQ27 194 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 A0A1W2PQ64 194 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 A0A1W2PQD8 194 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 GOLGA6CA6NDK9 693 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 GOLGA6DP0CG33 693 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 STIM1Q13586 685 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 SPECC1LQ69YQ0 1117 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 SLC35F6Q8N357 371 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 MSL3Q8N5Y2 521 aaKnown RBP21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 LINC00301Q8NCQ3 95 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 CCDC148Q8NFR7 591 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 GOLGA6AQ9NYA3 693 aa21.67■■□□□ 1.06
SMARCD1-201ENST00000381513 PPP1R12AO14974 1030 aaPredicted RBP21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 PFKFB1P16118 471 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 IRAK1P51617 712 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 KCNG4Q8TDN1 519 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 DLG5Q8TDM6 1919 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 BIRC2Q13490 618 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 PNOCQ13519 176 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 WAPLQ7Z5K2 1190 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 CDC5LQ99459 802 aaKnown RBP21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 ATP7BP35670 1465 aa21.66■■□□□ 1.06
SMARCD1-201ENST00000381513 TUBGCP6Q96RT7 1819 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 ZMYND10O75800 440 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 CALRP27797 417 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 GGCXP38435 758 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 SYKP43405 635 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 TRDNQ13061 729 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 HDGFL1Q5TGJ6 251 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 RNF217Q8TC41 542 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 GNGT1P63211 74 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 SMARCC2Q8TAQ2 1214 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 EDC3Q96F86 508 aaKnown RBP21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 INTS13Q9NVM9 706 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 RTEL1Q9NZ71 1219 aa21.65■■□□□ 1.06
SMARCD1-201ENST00000381513 CDHR2Q9BYE9 1310 aa21.64■■□□□ 1.06
SMARCD1-201ENST00000381513 MTHFSDQ2M296 383 aaKnown RBP21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 NCAPH2Q6IBW4 605 aa21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 ILDR1Q86SU0 546 aaPredicted RBP21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 CEP57Q86XR8 500 aa21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 ALDH8A1Q9H2A2 487 aaPredicted RBP21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 FRMD3A2A2Y4 597 aa21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 MIEF2Q96C03 454 aa21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 ODF2LQ9ULJ1 636 aa21.64■■□□□ 1.05
SMARCD1-201ENST00000381513 MAP9Q49MG5 647 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 LLPHQ9BRT6 129 aaKnown RBP21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 CAPS2Q9BXY5 557 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 ABCA9Q8IUA7 1624 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 PRPF6O94906 941 aaKnown RBP21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 PAX7P23759 505 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 GPTP24298 496 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 HSP90AB2PQ58FF8 381 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 SGSM3Q96HU1 749 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 TUBB4BP68371 445 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 TEFQ10587 303 aa21.63■■□□□ 1.05
SMARCD1-201ENST00000381513 MAP2P11137 1827 aaKnown RBP21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 EFCAB6Q5THR3 1501 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 NDUFAB1O14561 156 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 CTDNEP1O95476 244 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 TUBBP07437 444 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 NAIF1Q69YI7 327 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 CCDC129Q6ZRS4 1044 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 NAPGQ99747 312 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 HINFPQ9BQA5 517 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 PFKFB2O60825 505 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 RNF187Q5TA31 235 aaPredicted RBP21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 HPCAL4Q9UM19 191 aa21.62■■□□□ 1.05
SMARCD1-201ENST00000381513 TAF5LO75529 589 aa21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 CHST3Q7LGC8 479 aa21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 PPFIBP1Q86W92 1011 aa21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 GSPT2Q8IYD1 628 aaKnown RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 ADGRG1Q9Y653 693 aa21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 ARHGEF28Q8N1W1 1705 aaKnown RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 ACTN3Q08043 901 aaPredicted RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 TRMT44Q8IYL2 757 aaKnown RBP21.61■■□□□ 1.05
SMARCD1-201ENST00000381513 CEP120Q8N960 986 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms