RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PUF60Q9UHX1 559 aaKnown RBP19.51■□□□□ 0.71
SGCB-201ENST00000381431 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
SGCB-201ENST00000381431 IBSPP21815 317 aaPredicted RBP19.5■□□□□ 0.71
SGCB-201ENST00000381431 CYLC1P35663 651 aaPredicted RBP19.5■□□□□ 0.71
SGCB-201ENST00000381431 ARID5AQ03989 594 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 ATL3Q6DD88 541 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 GPT2Q8TD30 523 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
SGCB-201ENST00000381431 SH3TC1Q8TE82 1336 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 KRT2P35908 639 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 CALCOCO1Q9P1Z2 691 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 TPCN1Q9ULQ1 816 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 POTEB2H3BUK9 544 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 KCNH3Q9ULD8 1083 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 GUCA1BQ9UMX6 200 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 MAPK8IP1Q9UQF2 711 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.71
SGCB-201ENST00000381431 ATP5JP18859 108 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 IQUBQ8NA54 791 aa19.5■□□□□ 0.71
SGCB-201ENST00000381431 PLA2R1Q13018 1463 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 CALML3P27482 149 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 MTMR6Q9Y217 621 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 ELP1O95163 1332 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 RIOK3O14730 519 aaKnown RBP19.49■□□□□ 0.71
SGCB-201ENST00000381431 PROSER3Q2NL68 480 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 WWC2Q6AWC2 1192 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 ANTXR1Q9H6X2 564 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 SAMM50Q9Y512 469 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
SGCB-201ENST00000381431 PBRM1Q86U86 1689 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 CCT6AP40227 531 aaKnown RBP19.49■□□□□ 0.71
SGCB-201ENST00000381431 ZNF75DP51815 510 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 ADCK5Q3MIX3 580 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 TPTE2Q6XPS3 522 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 DYDC1Q8WWB3 177 aa19.49■□□□□ 0.71
SGCB-201ENST00000381431 CTNNBL1Q8WYA6 563 aaPredicted RBP19.49■□□□□ 0.71
SGCB-201ENST00000381431 GSTTP1A0A1W2PQM5 241 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 ZNF202O95125 648 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 TNNI2P48788 182 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 FAM107BQ9H098 131 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 KIF24Q5T7B8 1368 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 GSTO1P78417 241 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 ZNF569Q5MCW4 686 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 TMEM2Q9UHN6 1383 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 POLR2DO15514 142 aaKnown RBP19.48■□□□□ 0.71
SGCB-201ENST00000381431 METP08581 1390 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 E7EWF7 191 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 PHACTR2O75167 634 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 UBXN1Q04323 297 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 RILPL1Q5EBL4 403 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 SYCP3Q8IZU3 236 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 PLCD4Q9BRC7 762 aa19.48■□□□□ 0.71
SGCB-201ENST00000381431 IBTKQ9P2D0 1353 aaPredicted RBP19.47■□□□□ 0.71
SGCB-201ENST00000381431 CALM1P0DP23 149 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 CALM2P0DP24 149 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 CALM3P0DP25 149 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 NAA15Q9BXJ9 866 aaKnown RBP19.47■□□□□ 0.71
SGCB-201ENST00000381431 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 TMEM87BQ96K49 555 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 YEATS2Q9ULM3 1422 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 KRT40Q6A162 431 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 DTHD1Q6ZMT9 781 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 TTC6Q86TZ1 520 aa19.47■□□□□ 0.71
SGCB-201ENST00000381431 TTLL7Q6ZT98 887 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 CCDC42Q96M95 316 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 U2AF2P26368 475 aaKnown RBP eCLIP19.46■□□□□ 0.71
SGCB-201ENST00000381431 CAPZA3Q96KX2 299 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 BAG1Q99933 345 aaPredicted RBP19.46■□□□□ 0.71
SGCB-201ENST00000381431 CTAGE9A4FU28 777 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 RHOXF2BP0C7M4 288 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 MAATS1Q7Z4T9 603 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 EHBP1Q8NDI1 1231 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 RHOXF2Q9BQY4 288 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 RTL9Q8NET4 1388 aa19.46■□□□□ 0.71
SGCB-201ENST00000381431 GOLGA6L7A0A1B0GV03 622 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 FANCCQ00597 558 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 CTDSPL2Q05D32 466 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 CETN1Q12798 172 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 PUM3Q15397 648 aaKnown RBP19.45■□□□□ 0.7
SGCB-201ENST00000381431 KCNJ14Q9UNX9 436 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 TBCAO75347 108 aaKnown RBP19.45■□□□□ 0.7
SGCB-201ENST00000381431 STAMQ92783 540 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 GTF3C6Q969F1 213 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 USP28Q96RU2 1077 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 VPS16Q9H269 839 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 NR1I2O75469 434 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 CETN2P41208 172 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 PAF1Q8N7H5 531 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 KIF5AQ12840 1032 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 WDR78Q5VTH9 848 aa19.45■□□□□ 0.7
SGCB-201ENST00000381431 SRRTQ9BXP5 876 aaKnown RBP19.45■□□□□ 0.7
SGCB-201ENST00000381431 LUC7L2Q9Y383 392 aaKnown RBP19.45■□□□□ 0.7
SGCB-201ENST00000381431 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
SGCB-201ENST00000381431 ZSWIM6Q9HCJ5 1215 aa19.44■□□□□ 0.7
SGCB-201ENST00000381431 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms