RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PATL2C9JE40 543 aaKnown RBP27.18■■□□□ 1.94
VPS16-201ENST00000380443 PRC1O43663 620 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 TSPY26PQ9H489 355 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 ZPR1O75312 459 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 GTF2E1P29083 439 aaPredicted RBP27.18■■□□□ 1.94
VPS16-201ENST00000380443 SLC27A3Q5K4L6 730 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 ATL3Q6DD88 541 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 SETDB2Q96T68 719 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 RBSNQ9H1K0 784 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 WWC3Q9ULE0 1092 aa27.18■■□□□ 1.94
VPS16-201ENST00000380443 SALL1Q9NSC2 1324 aa27.17■■□□□ 1.94
VPS16-201ENST00000380443 HAND2P61296 217 aa27.17■■□□□ 1.94
VPS16-201ENST00000380443 BCL2L12Q9HB09 334 aa27.17■■□□□ 1.94
VPS16-201ENST00000380443 RTCBQ9Y3I0 505 aaKnown RBP27.17■■□□□ 1.94
VPS16-201ENST00000380443 ZNF804BA4D1E1 1349 aa27.17■■□□□ 1.94
VPS16-201ENST00000380443 PTPDC1A2A3K4 754 aa27.16■■□□□ 1.94
VPS16-201ENST00000380443 HMGB2P26583 209 aaKnown RBP27.16■■□□□ 1.94
VPS16-201ENST00000380443 PROM2Q8N271 834 aa27.16■■□□□ 1.94
VPS16-201ENST00000380443 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
VPS16-201ENST00000380443 PNPLA7Q6ZV29 1317 aa27.16■■□□□ 1.94
VPS16-201ENST00000380443 RESTQ13127 1097 aa27.16■■□□□ 1.94
VPS16-201ENST00000380443 TBC1D9BQ66K14 1250 aa27.16■■□□□ 1.94
VPS16-201ENST00000380443 CFAP45Q9UL16 551 aa27.16■■□□□ 1.94
VPS16-201ENST00000380443 COL24A1Q17RW2 1714 aa27.15■■□□□ 1.94
VPS16-201ENST00000380443 CTDNEP1O95476 244 aa27.15■■□□□ 1.94
VPS16-201ENST00000380443 APPP05067 770 aa27.15■■□□□ 1.94
VPS16-201ENST00000380443 BCAMP50895 628 aa27.15■■□□□ 1.94
VPS16-201ENST00000380443 MAGEB6Q8N7X4 407 aa27.15■■□□□ 1.94
VPS16-201ENST00000380443 NLRP3Q96P20 1036 aa27.15■■□□□ 1.94
VPS16-201ENST00000380443 ZBTB22O15209 634 aa27.14■■□□□ 1.94
VPS16-201ENST00000380443 LY75O60449 1722 aa27.14■■□□□ 1.94
VPS16-201ENST00000380443 TPTE2Q6XPS3 522 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 FERMT3Q86UX7 667 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 TMEM87BQ96K49 555 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 MYO5AQ9Y4I1 1855 aaKnown RBP27.13■■□□□ 1.93
VPS16-201ENST00000380443 SEMA3EO15041 775 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 CAVIN4Q5BKX8 364 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 TRIM44Q96DX7 344 aaPredicted RBP27.13■■□□□ 1.93
VPS16-201ENST00000380443 DDX11Q96FC9 970 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 NACAP1Q9BZK3 213 aa27.13■■□□□ 1.93
VPS16-201ENST00000380443 GNPATO15228 680 aa27.12■■□□□ 1.93
VPS16-201ENST00000380443 CCT2P78371 535 aaKnown RBP27.12■■□□□ 1.93
VPS16-201ENST00000380443 TTC6Q86TZ1 520 aa27.12■■□□□ 1.93
VPS16-201ENST00000380443 SPATA32Q96LK8 384 aa27.12■■□□□ 1.93
VPS16-201ENST00000380443 CNNM2Q9H8M5 875 aa27.12■■□□□ 1.93
VPS16-201ENST00000380443 ANTXR2P58335 489 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 TMED8Q6PL24 325 aaPredicted RBP27.11■■□□□ 1.93
VPS16-201ENST00000380443 CHST3Q7LGC8 479 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 NBPF5PQ86XG9 351 aaPredicted RBP27.11■■□□□ 1.93
VPS16-201ENST00000380443 IFNL3Q8IZI9 196 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 ANKRD2Q9GZV1 360 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 MINPP1Q9UNW1 487 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 CARMIL3Q8ND23 1372 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 NAPBQ9H115 298 aa27.11■■□□□ 1.93
VPS16-201ENST00000380443 NAP1L2Q9ULW6 460 aaPredicted RBP27.11■■□□□ 1.93
VPS16-201ENST00000380443 ANGEL1Q9UNK9 670 aaKnown RBP27.11■■□□□ 1.93
VPS16-201ENST00000380443 A0A1B0GUL6 1792 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 KLF18A0A0U1RQI7 1052 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 MBD4O95243 580 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 UVSSAQ2YD98 709 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 MTA3Q9BTC8 594 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 NBPF3Q9H094 633 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 LRP2BPQ9P2M1 347 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 DENND2AQ9ULE3 1009 aa27.1■■□□□ 1.93
VPS16-201ENST00000380443 PDS5AQ29RF7 1337 aaKnown RBP27.1■■□□□ 1.93
VPS16-201ENST00000380443 SNAP23O00161 211 aa27.09■■□□□ 1.93
VPS16-201ENST00000380443 RPS8P62241 208 aaKnown RBP27.09■■□□□ 1.93
VPS16-201ENST00000380443 GOLGA6L4A6NEF3 574 aa27.09■■□□□ 1.93
VPS16-201ENST00000380443 DTNBO60941 627 aa27.09■■□□□ 1.93
VPS16-201ENST00000380443 IGSF3O75054 1194 aa27.09■■□□□ 1.93
VPS16-201ENST00000380443 BICDL1Q6ZP65 573 aa27.09■■□□□ 1.93
VPS16-201ENST00000380443 C3orf67Q6ZVT6 689 aa27.09■■□□□ 1.93
VPS16-201ENST00000380443 LEO1Q8WVC0 666 aaPredicted RBP27.09■■□□□ 1.93
VPS16-201ENST00000380443 TAF1LQ8IZX4 1826 aa27.08■■□□□ 1.93
VPS16-201ENST00000380443 ZNF396Q96N95 335 aaPredicted RBP27.08■■□□□ 1.93
VPS16-201ENST00000380443 KRT23Q9C075 422 aa27.08■■□□□ 1.93
VPS16-201ENST00000380443 LRRC4BQ9NT99 713 aa27.08■■□□□ 1.93
VPS16-201ENST00000380443 CASZ1Q86V15 1759 aa27.07■■□□□ 1.92
VPS16-201ENST00000380443 GOLGA8BA8MQT2 603 aa27.07■■□□□ 1.92
VPS16-201ENST00000380443 TBC1D10CQ8IV04 446 aa27.07■■□□□ 1.92
VPS16-201ENST00000380443 ARHGEF1Q92888 912 aaKnown RBP27.07■■□□□ 1.92
VPS16-201ENST00000380443 NCOA5Q9HCD5 579 aaKnown RBP27.07■■□□□ 1.92
VPS16-201ENST00000380443 SH2B2O14492 632 aaPredicted RBP27.06■■□□□ 1.92
VPS16-201ENST00000380443 ADRA2BP18089 450 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 KCNQ4P56696 695 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 HS1BP3Q53T59 392 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 HPS5Q9UPZ3 1129 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 TIAM2Q8IVF5 1701 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 GSG1L2A8MUP6 293 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 CDKL5O76039 1030 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 PDLIM2Q96JY6 352 aa27.06■■□□□ 1.92
VPS16-201ENST00000380443 SRP68Q9UHB9 627 aaKnown RBP27.06■■□□□ 1.92
VPS16-201ENST00000380443 CPLX1O14810 134 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 LIFRP42702 1097 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 TRAPPC3LQ5T215 181 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 CPLX2Q6PUV4 134 aaKnown RBP27.05■■□□□ 1.92
VPS16-201ENST00000380443 FBXO33Q7Z6M2 555 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 VPS37DQ86XT2 251 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 ARMT1Q9H993 441 aa27.05■■□□□ 1.92
VPS16-201ENST00000380443 EPB41L4AQ9HCS5 686 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 708.3 ms