RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 AKAP11Q9UKA4 1901 aa20.82■□□□□ 0.92
HMGN4-201ENST00000377575 SEMA3EO15041 775 aa20.82■□□□□ 0.92
HMGN4-201ENST00000377575 SLC10A3P09131 477 aa20.82■□□□□ 0.92
HMGN4-201ENST00000377575 SPDYE2Q495Y8 402 aa20.82■□□□□ 0.92
HMGN4-201ENST00000377575 DENND2AQ9ULE3 1009 aa20.82■□□□□ 0.92
HMGN4-201ENST00000377575 FAM155AB1AL88 458 aaPredicted RBP20.81■□□□□ 0.92
HMGN4-201ENST00000377575 TFCP2Q12800 502 aa20.81■□□□□ 0.92
HMGN4-201ENST00000377575 G3BP1Q13283 466 aaKnown RBP eCLIP20.81■□□□□ 0.92
HMGN4-201ENST00000377575 GRIK5Q16478 980 aa20.81■□□□□ 0.92
HMGN4-201ENST00000377575 COL13A1Q5TAT6 717 aaPredicted RBP20.81■□□□□ 0.92
HMGN4-201ENST00000377575 ARMC9Q7Z3E5 817 aa20.81■□□□□ 0.92
HMGN4-201ENST00000377575 A0A1B0GUL7 405 aa20.8■□□□□ 0.92
HMGN4-201ENST00000377575 ZBTB7BO15156 539 aaPredicted RBP20.8■□□□□ 0.92
HMGN4-201ENST00000377575 ZBTB22O15209 634 aa20.8■□□□□ 0.92
HMGN4-201ENST00000377575 CA12O43570 354 aa20.8■□□□□ 0.92
HMGN4-201ENST00000377575 PHKA1P46020 1223 aa20.8■□□□□ 0.92
HMGN4-201ENST00000377575 C1orf115Q9H7X2 142 aa20.8■□□□□ 0.92
HMGN4-201ENST00000377575 PRDM10Q9NQV6 1147 aa20.8■□□□□ 0.92
HMGN4-201ENST00000377575 ZNF70Q9UC06 446 aaPredicted RBP20.8■□□□□ 0.92
HMGN4-201ENST00000377575 AOX1Q06278 1338 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 ADORA1P30542 326 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 ATP8B2P98198 1209 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 POLA2Q14181 598 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
HMGN4-201ENST00000377575 CCDC102BQ68D86 513 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 RASAL3Q86YV0 1011 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 PANK1Q8TE04 598 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 SSH3Q8TE77 659 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 MRIQ9BWK5 157 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 TDRD3Q9H7E2 651 aaKnown RBP20.79■□□□□ 0.92
HMGN4-201ENST00000377575 RCAN3Q9UKA8 241 aa20.79■□□□□ 0.92
HMGN4-201ENST00000377575 SALL1Q9NSC2 1324 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 SSC5DA1L4H1 1573 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 HSPA8P11142 646 aaKnown RBP20.78■□□□□ 0.92
HMGN4-201ENST00000377575 TNNI2P48788 182 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 TIMM10P62072 90 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 SUPT20HL1Q3ZLR7 823 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 MOB2Q70IA6 237 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 ZGPATQ8N5A5 531 aaKnown RBP20.78■□□□□ 0.92
HMGN4-201ENST00000377575 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 ZDHHC15Q96MV8 337 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 TMOD2Q9NZR1 351 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 MYH2Q9UKX2 1941 aa20.78■□□□□ 0.92
HMGN4-201ENST00000377575 PDS5AQ29RF7 1337 aaKnown RBP20.78■□□□□ 0.92
HMGN4-201ENST00000377575 UBE2Q2LH0YL09 131 aa20.77■□□□□ 0.92
HMGN4-201ENST00000377575 LBX1P52954 281 aa20.77■□□□□ 0.92
HMGN4-201ENST00000377575 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
HMGN4-201ENST00000377575 RASA3Q14644 834 aa20.77■□□□□ 0.92
HMGN4-201ENST00000377575 HHIPL2Q6UWX4 724 aa20.77■□□□□ 0.92
HMGN4-201ENST00000377575 NEUROD6Q96NK8 337 aa20.77■□□□□ 0.92
HMGN4-201ENST00000377575 OTOFQ9HC10 1997 aa20.77■□□□□ 0.92
HMGN4-201ENST00000377575 PPP1R12BO60237 982 aaPredicted RBP20.76■□□□□ 0.91
HMGN4-201ENST00000377575 LDHBP07195 334 aaKnown RBP20.76■□□□□ 0.91
HMGN4-201ENST00000377575 PRKG1Q13976 671 aa20.76■□□□□ 0.91
HMGN4-201ENST00000377575 REM2Q8IYK8 340 aaPredicted RBP20.76■□□□□ 0.91
HMGN4-201ENST00000377575 ANGEL1Q9UNK9 670 aaKnown RBP20.76■□□□□ 0.91
HMGN4-201ENST00000377575 KIF23Q02241 960 aaPredicted RBP20.75■□□□□ 0.91
HMGN4-201ENST00000377575 RASGRF1Q13972 1273 aa20.75■□□□□ 0.91
HMGN4-201ENST00000377575 GORABQ5T7V8 394 aa20.75■□□□□ 0.91
HMGN4-201ENST00000377575 IFFO2Q5TF58 517 aa20.75■□□□□ 0.91
HMGN4-201ENST00000377575 TNS4Q8IZW8 715 aa20.75■□□□□ 0.91
HMGN4-201ENST00000377575 ZIC5Q96T25 663 aa20.75■□□□□ 0.91
HMGN4-201ENST00000377575 LAMB1P07942 1786 aa20.74■□□□□ 0.91
HMGN4-201ENST00000377575 TCP10L2B9ZVM9 353 aa20.74■□□□□ 0.91
HMGN4-201ENST00000377575 SURF6O75683 361 aaKnown RBP20.74■□□□□ 0.91
HMGN4-201ENST00000377575 PRDX5P30044 214 aa20.74■□□□□ 0.91
HMGN4-201ENST00000377575 MAP3K11Q16584 847 aa20.74■□□□□ 0.91
HMGN4-201ENST00000377575 DDX19BQ9UMR2 479 aa20.74■□□□□ 0.91
HMGN4-201ENST00000377575 IREB2P48200 963 aaKnown RBP20.73■□□□□ 0.91
HMGN4-201ENST00000377575 NBPF12Q5TAG4 269 aaPredicted RBP20.73■□□□□ 0.91
HMGN4-201ENST00000377575 APOBEC3HQ6NTF7 200 aaKnown RBP20.73■□□□□ 0.91
HMGN4-201ENST00000377575 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
HMGN4-201ENST00000377575 CHMP4BQ9H444 224 aaKnown RBP20.73■□□□□ 0.91
HMGN4-201ENST00000377575 GPR108Q9NPR9 543 aa20.73■□□□□ 0.91
HMGN4-201ENST00000377575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
HMGN4-201ENST00000377575 UNCXA6NJT0 531 aa20.72■□□□□ 0.91
HMGN4-201ENST00000377575 LDLRAD1Q5T700 205 aa20.72■□□□□ 0.91
HMGN4-201ENST00000377575 FKBP1CQ5VVH2 108 aa20.72■□□□□ 0.91
HMGN4-201ENST00000377575 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
HMGN4-201ENST00000377575 SAGE1Q9NXZ1 904 aa20.72■□□□□ 0.91
HMGN4-201ENST00000377575 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
HMGN4-201ENST00000377575 MAST2Q6P0Q8 1798 aa20.72■□□□□ 0.91
HMGN4-201ENST00000377575 AK9Q5TCS8 1911 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 ARID4AP29374 1257 aaPredicted RBP20.71■□□□□ 0.91
HMGN4-201ENST00000377575 DIXDC1Q155Q3 683 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 SPTY2D1Q68D10 685 aaPredicted RBP20.71■□□□□ 0.91
HMGN4-201ENST00000377575 FAM83AQ86UY5 434 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 DZIP1Q86YF9 867 aaKnown RBP20.71■□□□□ 0.91
HMGN4-201ENST00000377575 TMEM39BQ9GZU3 492 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 TSKSQ9UJT2 592 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 DAGLAQ9Y4D2 1042 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
HMGN4-201ENST00000377575 RPAP1Q9BWH6 1393 aaPredicted RBP20.71■□□□□ 0.91
HMGN4-201ENST00000377575 UQCRFS1P1P0C7P4 283 aa20.7■□□□□ 0.9
HMGN4-201ENST00000377575 CACNB3P54284 484 aa20.7■□□□□ 0.9
HMGN4-201ENST00000377575 SLF2Q8IX21 1173 aa20.7■□□□□ 0.9
HMGN4-201ENST00000377575 TEPSINQ96N21 525 aa20.7■□□□□ 0.9
HMGN4-201ENST00000377575 ABCF2Q9UG63 623 aa20.7■□□□□ 0.9
HMGN4-201ENST00000377575 FZD1Q9UP38 647 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms