RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RIPOR2Q9Y4F9 1068 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 PCNTO95613 3336 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 ERICH2A1L162 156 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 RIMBP2O15034 1052 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 CYB5R4Q7L1T6 521 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 ALG1Q9BT22 464 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 TM6SF1Q9BZW5 370 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 NRBP1Q9UHY1 535 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 CLIC4Q9Y696 253 aa12.61□□□□□ -0.39
CXCL12-203ENST00000374429 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-203ENST00000374429 ZNF165P49910 485 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
CXCL12-203ENST00000374429 PGBD1Q96JS3 809 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 UBAC1Q9BSL1 405 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
CXCL12-203ENST00000374429 TCHHQ07283 1943 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
CXCL12-203ENST00000374429 COBLO75128 1261 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 RFC4P35249 363 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 TYRO3Q06418 890 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 MFSD6Q6ZSS7 791 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 CLIC6Q96NY7 704 aa12.6□□□□□ -0.39
CXCL12-203ENST00000374429 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 STAMQ92783 540 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 SAP30BPQ9UHR5 308 aaKnown RBP12.59□□□□□ -0.39
CXCL12-203ENST00000374429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
CXCL12-203ENST00000374429 NMT2O60551 498 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 CTDNEP1O95476 244 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 SCAND2PQ9GZW5 306 aaPredicted RBP12.59□□□□□ -0.39
CXCL12-203ENST00000374429 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 USP21Q9UK80 565 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 AKAP17AQ02040 695 aaKnown RBP12.59□□□□□ -0.39
CXCL12-203ENST00000374429 LRMPQ12912 555 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 TMX1Q9H3N1 280 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 TRMT1Q9NXH9 659 aaKnown RBP12.59□□□□□ -0.39
CXCL12-203ENST00000374429 MRVI1Q9Y6F6 885 aa12.59□□□□□ -0.39
CXCL12-203ENST00000374429 CAVIN4Q5BKX8 364 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 USP42Q9H9J4 1324 aaKnown RBP12.58□□□□□ -0.4
CXCL12-203ENST00000374429 ZBTB43O43298 467 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 TOM1O60784 492 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 SMC2O95347 1197 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 PTGS1P23219 599 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
CXCL12-203ENST00000374429 SMAP1Q8IYB5 467 aaPredicted RBP12.58□□□□□ -0.4
CXCL12-203ENST00000374429 LPIN2Q92539 896 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 ZSWIM5Q9P217 1185 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
CXCL12-203ENST00000374429 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
CXCL12-203ENST00000374429 RASSF8Q8NHQ8 419 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 CFAP45Q9UL16 551 aa12.58□□□□□ -0.4
CXCL12-203ENST00000374429 G3V3G9 751 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 IFNL3Q8IZI9 196 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 FAM177A1Q8N128 213 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-203ENST00000374429 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 NEDD4P46934 1319 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
CXCL12-203ENST00000374429 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 MED23Q9ULK4 1368 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 NACAP1Q9BZK3 213 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 CPVLQ9H3G5 476 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 CDC27P30260 824 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
CXCL12-203ENST00000374429 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
CXCL12-203ENST00000374429 DIXDC1Q155Q3 683 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 PPP4R3BQ5MIZ7 849 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 KLHL10Q6JEL2 608 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 CCDC186Q7Z3E2 898 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
CXCL12-203ENST00000374429 PES1O00541 588 aaKnown RBP12.56□□□□□ -0.4
CXCL12-203ENST00000374429 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
CXCL12-203ENST00000374429 PRDX5P30044 214 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 GUCY1A2P33402 732 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 ADD2P35612 726 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 ARID5BQ14865 1188 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 PLIN2Q99541 437 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 STX8Q9UNK0 236 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 CYP2D6P10635 497 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 NAA16Q6N069 864 aaPredicted RBP12.56□□□□□ -0.4
CXCL12-203ENST00000374429 FAM196AQ6ZSG2 479 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 DSCC1Q9BVC3 393 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
CXCL12-203ENST00000374429 USP17L12C9JPN9 530 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 USP17L21D6R901 530 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 NR5A1Q13285 461 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 DHX8Q14562 1220 aaKnown RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 ZSCAN25Q6NSZ9 544 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 OLFM4Q6UX06 510 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms