RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 BARGINQ6ZT62 677 aa18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 PTMAP06454 111 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 USP28Q96RU2 1077 aa18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 STRBPQ96SI9 672 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.76■□□□□ 0.59
CNKSR1-202ENST00000374253 ADD1P35611 737 aaKnown RBP18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 TRDNQ13061 729 aa18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 EPB41L4AQ9HCS5 686 aaPredicted RBP18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 NEDD4P46934 1319 aa18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 ILDR1Q86SU0 546 aaPredicted RBP18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 NAP1L5Q96NT1 182 aaPredicted RBP18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 MYL10Q9BUA6 226 aa18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 TNMDQ9H2S6 317 aa18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 ZSCAN16Q9H4T2 348 aaPredicted RBP18.75■□□□□ 0.59
CNKSR1-202ENST00000374253 GYG1P46976 350 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 AK7Q96M32 723 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 SRP68Q9UHB9 627 aaKnown RBP18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 DDX60Q8IY21 1712 aaKnown RBP18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 CPLX1O14810 134 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 POLR3DP05423 398 aaPredicted RBP18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 GTF2E1P29083 439 aaPredicted RBP18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 MAP3K12Q12852 859 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 MAP3K11Q16584 847 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 NAA16Q6N069 864 aaPredicted RBP18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 AIFM3Q96NN9 605 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
CNKSR1-202ENST00000374253 TOM1O60784 492 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 LCORLQ8N3X6 602 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 ZNF830Q96NB3 372 aaPredicted RBP18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 ORC3Q9UBD5 711 aaPredicted RBP18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 ADCY5O95622 1261 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 MICU3Q86XE3 530 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 LRP2BPQ9P2M1 347 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 ZNF652Q9Y2D9 606 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 TACC3Q9Y6A5 838 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 LRP5O75197 1615 aa18.73■□□□□ 0.59
CNKSR1-202ENST00000374253 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 AP5Z1O43299 807 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 RRP12Q5JTH9 1297 aaKnown RBP18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 TBC1D9BQ66K14 1250 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 IFNL3Q8IZI9 196 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 NAPBQ9H115 298 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 TOMM22Q9NS69 142 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 CFAP45Q9UL16 551 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 CCDC192P0DO97 292 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 EVCP57679 992 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 KIF3AQ9Y496 699 aa18.72■□□□□ 0.59
CNKSR1-202ENST00000374253 SMIM22K7EJ46 135 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 TYRO3Q06418 890 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 C8orf76Q96K31 380 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 ZKSCAN3Q9BRR0 538 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 ATRNO75882 1429 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 A0A087WWV3 80 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 UBE2Q2LH0YL09 131 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 ADGRA1Q86SQ6 560 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 CELF1Q92879 486 aaKnown RBP18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 PHKBQ93100 1093 aa18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 ANGEL1Q9UNK9 670 aaKnown RBP18.71■□□□□ 0.59
CNKSR1-202ENST00000374253 GOLPH3LQ9H4A5 285 aa18.7■□□□□ 0.58
CNKSR1-202ENST00000374253 MRVI1Q9Y6F6 885 aa18.7■□□□□ 0.58
CNKSR1-202ENST00000374253 SLC4A4Q9Y6R1 1079 aa18.7■□□□□ 0.58
CNKSR1-202ENST00000374253 NFXL1Q6ZNB6 911 aa18.7■□□□□ 0.58
CNKSR1-202ENST00000374253 LUZP1Q86V48 1076 aa18.7■□□□□ 0.58
CNKSR1-202ENST00000374253 ERCC4Q92889 916 aaPredicted RBP18.7■□□□□ 0.58
CNKSR1-202ENST00000374253 GSG1L2A8MUP6 293 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 PATL2C9JE40 543 aaKnown RBP18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 CDC27P30260 824 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 ME1P48163 572 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 TDO2P48775 406 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 ANKRD18AQ8IVF6 992 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 SH2B2O14492 632 aaPredicted RBP18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 KLRK1P26718 216 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 METAP2P50579 478 aaKnown RBP eCLIP18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 ANO6Q4KMQ2 910 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 SLC51AQ86UW1 340 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 SDR42E1Q8WUS8 393 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 CDC5LQ99459 802 aaKnown RBP18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 CLSTN2Q9H4D0 955 aa18.69■□□□□ 0.58
CNKSR1-202ENST00000374253 KIF28PB7ZC32 967 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 GNPATO15228 680 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 RAI14Q9P0K7 980 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 ZSWIM5Q9P217 1185 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 BCL9LQ86UU0 1499 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 UVSSAQ2YD98 709 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 TMEM67Q5HYA8 995 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 DDX19AQ9NUU7 478 aaKnown RBP18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 ZKSCAN5Q9Y2L8 839 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 CLIC4Q9Y696 253 aa18.68■□□□□ 0.58
CNKSR1-202ENST00000374253 DHX16O60231 1041 aaKnown RBP18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 CYP7A1P22680 504 aa18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 APOA5Q6Q788 366 aa18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 RCOR1Q9UKL0 485 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms